Ziziphus jujuba (Chinese jujube): 107411699
Help
Entry
107411699 CDS
T04794
Name
(RefSeq) phytochrome A
KO
K12120
phytochrome A
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
107411699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
107411699
NCBI-ProteinID:
XP_048323917
LinkDB
All DBs
Position
10:join(19204962..19207005,19207393..19208209,19209119..19209409,19209534..19209774)
Genome browser
AA seq
1130 aa
AA seq
DB search
MSSSRPTNSSSSRHSARIIAQTTVDAKLHADFEETGSSFDYSSSVRVTNSVGLDVPPRTN
KVTTAYLHQIQKGKLIQPFGCLLALDEKTLKVIAYSENAPEMLTMVSHAVPSVGDHPVLG
IGTDVRTIFTGPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEP
VKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKF
HDDDHGEVVSEITKPGLEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCRAKHVKVLQDE
KLQFDLTFCGSTLRAPHSCHVQYMENMDSIASLVMAVVVNEGDDEGDSPDSAQPQKRKRL
WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEFELENQIIEKKILRTQTLLCDMLM
RDAPLGIVNQSPNIMDLVKCDGAALLYKGKIWRLGVSPSDYHIHDIVSWLSEYHMDSTGL
STDSLHDAGFPGALALGDGVCGMAAVRITSKDMIFWFRSHTAGEVRWGGAKHEPGEQDDG
RKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVETLDAKTNTIHSRLN
DLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLPVDKAIGKHL
LTLVEDSSIDVVKKMLDLALHGKEEKNVQFEIKTHASKIDSGPISLVVNACASRDLSENV
VGVCFVAQDITGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGADEFGWCSEWNPAMIKL
TGWKREEVVDKMLLGEVFGIHTACCRLKNQETFINLGVVLNHAMTGQELEKVPFGFFSRN
GKYIECLLCVTKKLDREGAVTGVFCFLQLASQELQHALNVQRLTEQTAVKRLKALTYIKR
QIRNPLSGIIFSRKMLEGTELGAEQKQLLHTSAQCQRQLSKVLDDSDLDIIIDGYSDLEM
VEFTLHEVLVASISQVMMKSKARGIRLVNDAVEEIMTETLYGDSLRLQQVLADFLLVAVN
VTPTGGQLVIAASLSKDQLGESVHLVHVVIRITHTGAGMPEALLNQMFGNDETISEEGLG
LLVSRKLVKLMNGDVKYLREAGKSSFIISAELAGTQKSGKRSLGKNHDEI
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttcaaggcccaccaactcatccagctcaagacacagtgcaaggattattgct
cagaccactgtagatgcaaagcttcatgcagattttgaggagacgggtagttcctttgac
tactcaagctcagtacgtgttaccaattcagttggcctggatgtgccacctaggactaac
aaagtaacaactgcttatctccaccaaattcagaaaggaaagctgatccagccatttggt
tgcttgctggccttagatgaaaaaactctaaaggtcatcgcatatagtgagaatgctcct
gaaatgttgacaatggtcagtcatgcagttccaagtgttggggatcaccctgttcttggc
attggaacagacgtcaggacaatttttactggtcctagtgcctctgcattgcaaaaggca
ctaggatttggggaggtttctctcttgaatcccatactagtccattgtaagacctctgga
aagccattttatgcgattgtccatagggtaacaggtagcttgatagttgactttgagcca
gtgaagccgtatgaagtccccatgactgctgctggggctctgcaatcatacaagctagca
gccaaagcaattacccgattgcagtctttgccaagtgggagcatggagagactttgtgat
acgatggtccaagaggtttttgaactcacaggttatgacagggtgatggcctataagttt
catgatgatgatcatggagaagtggtctctgagatcacaaagcctggtctggagccatat
ctgggtttgcattatccagccactgatatcccacaggcttcacgattcttgtttatgaaa
aataaggttcgtatgattgttgattgtcgtgcaaaacatgtgaaggtgcttcaagatgag
aaacttcaatttgatctaaccttttgtggttcaacattaagagctccacatagttgccat
gtacaatatatggagaacatggattccattgcttcgctggttatggctgtagtggtcaat
gagggggatgatgagggtgatagccctgattctgcacagccacagaagagaaagagactc
tggggtttagtagtgtgccacaacacaactcccagatttgttccgttccctcttaggtat
gcttgtgagttcctagcccaagtatttgctatccatgtgaataaggaatttgaattagaa
aatcagatcattgagaagaagatcctgcggactcagacacttttgtgtgatatgctgatg
agagacgcaccattgggtattgtgaatcaaagcccaaatataatggatttggtgaaatgt
gatggggctgctttattatacaaaggcaagatctggagactaggagtcagtcccagtgac
taccatattcatgacatagtctcatggctctctgagtaccatatggattccacaggtttg
agtacagatagcttgcatgatgctggttttcctggagctcttgctctcggtgatggagta
tgtggaatggcagctgtaagaataacttccaaggacatgattttctggttccggtcccac
acagctggagaagtccgatggggtggtgcaaaacatgaacctggtgagcaggatgatggt
agaaagatgcacccaaggtcatcttttaaggcttttcttgaagttgtcaaaacaaggagc
ttaccttggaaggattacgaaatggatgcgatccattcattgcagcttatcctgagaaat
gcatttaaagatgttgaaaccttggatgcaaaaaccaatacaattcattcaaggctgaat
gatttaaagattgaggggatgcaagaacttgaagctgtgacaagtgagatggttcgcttg
attgaaacagccacggtgccaattttagcagtagatgttgatgggttggttaatgggtgg
aatacaaaaattgctgagctaactggtcttcctgttgataaagcaattggaaagcatttg
ctcacacttgtggaagattcttcaatagatgtagtaaaaaagatgttggacttggcattg
cacggcaaagaggagaaaaatgtacaatttgagatcaaaacacatgcttctaagattgac
tctggtcccattagcttagtagtgaatgcttgtgcaagcagggacctttctgaaaatgtt
gttggggtgtgttttgtggcacaagatattactggtcagaagactgtgatggacaagttt
acccggattgaaggcgattataaagcaattgtgcagaatccaaacccactgatacctcca
atatttggtgctgatgaatttggctggtgctctgagtggaatccagcaatgataaagtta
actgggtggaaacgagaagaggtagtggataaaatgcttttgggggaggtttttgggatc
cacacggcatgttgtcgtctcaagaatcaggaaacatttataaatcttggtgttgtactt
aatcatgccatgactggtcaggagctggaaaaggttccttttggttttttttcccggaat
ggaaaatatatagaatgcctactgtgtgtcactaagaaattggacagagagggtgcagtc
actggggtcttttgcttcttgcagcttgctagccaagagctgcagcacgcacttaatgtc
cagcgcctaaccgagcaaactgctgtgaagagattgaaagcattaacttatataaagaga
cagatccgtaacccattatctggaataatattttctaggaaaatgttggaaggtacagag
ttgggagcagaacagaagcagcttctgcatactagtgctcagtgccagcgtcagctcagc
aaggttcttgatgattctgacctcgatatcatcatagatggctactcagatctcgaaatg
gtcgagttcactttacatgaagtattagttgcctctatcagtcaagtcatgatgaagagt
aaagcgaggggaattcgtttagttaatgatgcggtagaagagatcatgactgaaacctta
tacggtgatagtctcaggcttcaacaagtgttggctgatttcttattggtagcagttaat
gtcacgccgactggaggccagcttgttattgcagccagtttgagcaaagatcagttggga
gagtctgttcatcttgtgcatgtggtgataaggataacacatactggtgctgggatgcca
gaagcattgctgaaccagatgtttggaaacgatgaaactatatcggaggagggtctgggc
cttctcgtcagcaggaaactggtgaagctgatgaatggagatgtaaaatatctgagggaa
gctggaaaatcgagcttcatcatatcggcagagcttgctggtacccagaaatctggtaaa
cggagtttgggcaagaatcatgatgaaatctga
DBGET
integrated database retrieval system
