KEGG   Ziziphus jujuba (Chinese jujube): 107411879
Entry
107411879         CDS       T04794                                 
Name
(RefSeq) cyclin-H1-1 isoform X1
  KO
K06634  cyclin H
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03022  Basal transcription factors
zju03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107411879
  09124 Replication and repair
   03420 Nucleotide excision repair
    107411879
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zju03021]
    107411879
   03400 DNA repair and recombination proteins [BR:zju03400]
    107411879
Transcription machinery [BR:zju03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     107411879
DNA repair and recombination proteins [BR:zju03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     107411879
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB RB_B ATP13
Other DBs
NCBI-GeneID: 107411879
NCBI-ProteinID: XP_015875034
UniProt: A0A6P3ZBD6
LinkDB
Position
10:complement(join(21666199..21666271,21666359..21666447,21666589..21666673,21666857..21666915,21667464..21667541,21667815..21667853,21668035..21668103,21668188..21668308,21668687..21668760,21668843..21668961,21669065..21669137,21669312..21669362,21670277..21670336))
AA seq 329 aa
MADFQTSTHRAKWIFTPQQLVDKYEAANQTAIQTLEKYGSTLMEVDADGSFSYPEPQVNA
NADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLVWSVMQH
HPKNIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNYEMIIYQSLEFDLIVYAPYRS
VEGFISVMEEFCGENDHLPVLQNLHEAAKMEVDKIMLTDAPLLFPPGQLALAALRSSNEV
HRVVDFERYLMSILSRQNSTDSISKLVQSLNEIDSWVRSYKFPSEKDLKHINRKLKSCWG
ISSHDESKKREKKSKHKSKKSSNEAENMP
NT seq 990 nt   +upstreamnt  +downstreamnt
atggccgattttcagacctctactcacagagccaagtggatctttactcctcaacaattg
gttgataagtatgaagctgctaatcagacagcaatacaaacattagagaagtatggatca
acactaatggaagtagatgccgatggatcattttcttaccctgaacctcaagttaatgca
aatgctgacaaacattcccgtccaaagccccttagtattgaggaagagcaatttatgcga
gtattttatgaaaataaacttcaagaagtgtgtaacaactttcatttccctcataaaatt
caggcaacagctctaatatatttcaaaaggttttatttggtatggtcggtaatgcaacat
catcccaaaaatataatgttgacctgcatatatgcagcttgtaagatagaagaaaatcac
gtgtcagctgaggagcttggtaaggggatctcgcaggaccatcaaatgatactcaattat
gagatgataatttatcagagtttagaatttgatcttattgtttatgcaccatatcgttct
gttgaaggtttcatcagtgtaatggaggagttttgcggagaaaatgatcatcttccagtg
ctacagaatttgcatgaagctgcgaaaatggaggttgataagatcatgcttacagatgca
ccacttctttttcctccagggcagttagcattggctgctttgcgtagttcaaatgaggtg
cacagagttgttgactttgagagatatttgatgagcattctctctcgtcaaaattctacc
gatagcatatcaaagcttgtccaatctctaaatgaaatagattcttgggtaaggagttat
aaattcccgtcagagaaggatctgaagcacatcaatcggaaactgaaatcttgctgggga
atcagctcacatgacgagagtaagaaacgtgagaagaaatctaagcacaagtcaaaaaaa
agttcaaatgaagcagaaaacatgccatag

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