KEGG   Ziziphus jujuba (Chinese jujube): 107411919
Entry
107411919         CDS       T04794                                 
Name
(RefSeq) splicing factor U2af large subunit B
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107411919
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zju03041]
    107411919
Spliceosome [BR:zju03041]
 Complex A
  U2 snRNP components
   U2 related factors
    107411919
 Complex B
    107411919
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 107411919
NCBI-ProteinID: XP_015875081
UniProt: A0A6P3ZJ91
LinkDB
Position
3:join(21568880..21570565,21570666..21570803,21572862..21572933,21573495..21573536,21573668..21573757,21574156..21574263,21574385..21574477,21574816..21574895,21574981..21575656)
AA seq 994 aa
MNTYSRHKEKNGKSSRVSVPENDEGSAARTRPFSFEEIMLRRKNKNLTENVNEGALGGEI
RSREDIVEHVSRGFESERDYGHLKDSSPIAEKYPSEEPVKQSSRNEEKNTSLNANSRGDF
DRGKDSGSHGMEIKVKARLKSIVNEVKGGLNDSQIYDRRKNEVNSRKEEKNTGLNDNQIY
DRRKNEVNSRKIEKNTNIKAKYEDDFHKGKDSRSGELETKLKSRPHKMDSKVKGGKYDRE
TFGRGKYDKLSANSIPNKAEKRHSKDMSVKESHADQSKGNSERERKRKYENGDDEKAKGR
ISAKKHDPGRHHDSDISERKDRREWSKLHVEESRLKRRRSRSKEHEDRNRRSTSHSPRAN
KHTSSYRGEHKQLPTHSLKDRSGRLHSDVDRSRVSNNGSSSQYLRNDDFASGIGGYSPRK
RRTEAAARTPPPASHLPEKKSAKWDLPPAATDNTLSSSVPSSFESSVNTVSSNAPQLASA
IPVTSTTMKPMSGVFANALSTKKFASFDSVQLTQATRPMRRLYVENVPSSISEKALVEYI
NGLLLSSGVNHVQGTQPCISCIINNEKGQALLEFLTPEDASAALSFDCSSISGSTLKLRR
PKDFVDVATGDPDKSMTAVDTISNVVKDSPNKVFIGGISKSLSSKMLLEIVSAFGPLKAY
HFEINEDLNEPCAFLEYADQSVTVKACAGLNGMKLGGKVLTVLQAVHGAASLENTAGSSL
YKIPEHAKPLLMQPTQIIKLKNVFNVEDLSSLSEQEVEDIVEDIRLECSRFGTVKSVNVV
RKGNSQITTSGACEIIKNTETTGLEQNSGCEIKNVETDTFEAHRNGEVSGSDSVDNLNNV
ELKEDGVATGEDDKPADCMNTSSSIHEELSNRLNSPKEVLECSNDKVADTISTDDIGSEN
KLVVEEESCLEEEVDGKEQKHGGQLDGSVGAESHEMGKVDMEDDDSDVGSVFVEFGRVEA
SCTAAHCLNGRLYDDRIVTVDYVAPDYYRKRFPK
NT seq 2985 nt   +upstreamnt  +downstreamnt
atgaacacatatagccggcataaagagaagaatggaaaaagtagcagggtttcagtgcct
gagaatgatgaaggaagtgctgctcgaacaaggcctttcagctttgaagagattatgctt
aggaggaagaacaagaacttaacagaaaatgtcaatgagggagctcttggaggagaaatt
aggtcaagggaagacatcgttgagcatgtttctcgtggatttgagtctgaaagagactac
ggacaccttaaagattcttcccccattgctgaaaagtatccatcagaagaaccagtgaaa
caaagttccagaaacgaagagaagaatacttccttgaatgctaattctagaggtgatttt
gatagagggaaagatagtggaagtcatggcatggaaatcaaagtgaaggcaagactaaaa
agtattgtaaatgaggttaaaggagggttaaatgacagtcaaatatatgataggagaaaa
aatgaagtaaattctagaaaggaagagaagaatactgggttaaatgacaatcaaatatat
gataggagaaaaaatgaagtaaattctagaaagatagagaagaatactaacataaaagct
aaatatgaggatgattttcataaagggaaagatagccggagtggtgagttggaaaccaaa
ttgaagtctagaccgcacaagatggatagtaaagtcaaaggaggcaaatatgacagagaa
acttttggtagggggaaatatgataagctttcagctaatagtatcccaaataaagctgaa
aagaggcattcaaaggatatgtctgtaaaggagagtcatgctgaccaaagtaaaggtaat
tctgaaagagaaagaaagagaaaatatgaaaacggagatgatgagaaagctaaaggcaga
atttctgctaagaaacatgatccaggtaggcatcatgactcagatatttcagagagaaag
gataggagagaatggtcaaaactacatgttgaagaatctaggctgaaaagaagacggtct
aggagtaaagaacatgaggatagaaatagaaggtcgacatctcactccccaagggcaaac
aagcatacatcttcttataggggggagcataaacagcttcctacacattccctgaaggat
aggtctggaagactgcattctgacgttgacaggagtagagtgtcaaataatggctcaagt
agtcaatatcttcgaaacgatgactttgcaagtggaattggtggctactccccgaggaag
aggagaactgaagctgctgctaggactcctccaccagctagtcatttgccagagaagaaa
agtgccaagtgggatctcccacctgcagcaactgacaacacattatcttcttcagttcct
tctagttttgagtcatcagtcaatactgtgtcctcaaatgcacctcagttggctagtgct
attcctgttacatctaccactatgaagcctatgtctggggtttttgccaatgctttatca
actaaaaagtttgcctcctttgactctgttcaactaacacaagctacccggcctatgaga
aggctttatgtcgaaaatgtaccttcttcgatatctgagaaagctttagtggaatatatt
aatggtcttttgttgtcatcaggtgttaatcatgtccaaggaacccaaccatgcattagc
tgtattattaacaatgagaaggggcaagctcttctggagtttcttacacctgaagatgcc
tcagcagctctttcttttgattgtagttctatttctggttccactctaaaacttagacgc
ccgaaggactttgttgatgtggcaactggtgacccagataaatcaatgactgcagttgat
accataagtaatgtcgtgaaggactcacctaacaaggttttcattggtggaatttcaaag
tctctttcatcaaaaatgcttttggagattgttagtgcctttggacctttgaaagcatac
cactttgagatcaatgaagatttgaatgaaccatgtgcttttctagagtatgcggatcaa
tcagttaccgtcaaagcttgtgcgggtctaaatggaatgaagttggggggcaaagtgttg
actgttcttcaggcagttcatggtgcagcatccttggaaaatactgctggaagttcactg
tataagatcccagagcatgcaaagccacttcttatgcagcctacccagattataaagctc
aaaaatgtgttcaatgtagaagatctctcttcactgtctgaacaagaagttgaagacatt
gttgaagacataagattggaatgttccaggtttgggactgttaaatctgttaatgttgta
agaaaaggaaatagtcaaattacgacatcaggagcatgtgaaatcatcaagaatacagaa
actacagggttggagcaaaactcagggtgtgagataaaaaatgtagagacagacactttt
gaagcgcataggaatggtgaggtcagtggaagtgactcagtagataacctaaacaatgtc
gaacttaaagaagacggtgtggcaacaggtgaagatgataaacctgccgactgcatgaac
acatctagtagcattcatgaagaactttccaaccggttgaacagcccaaaagaggtgttg
gaatgctccaatgacaaggttgctgacaccatttcgacggatgacattggctcggaaaac
aagttagtggttgaagaagagtcgtgtttggaggaggaagttgatggtaaggagcaaaaa
catggtggtcaattggatggtagtgtgggagcagaatcacatgaaatggggaaggttgac
atggaggatgatgatagtgatgtgggaagtgtttttgtggaatttggaagagtagaagcc
tcttgcacagcagcacattgtttgaatggacggctttatgatgacaggattgtaactgtg
gattatgttgctcctgattattacaggaaaaggtttcctaaataa

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