KEGG   Ziziphus jujuba (Chinese jujube): 107412330
Entry
107412330         CDS       T04794                                 
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X3
  KO
K10779  transcriptional regulator ATRX
Organism
zju  Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:zju00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:zju03000]
    107412330
   03036 Chromosome and associated proteins [BR:zju03036]
    107412330
Transcription factors [BR:zju03000]
 Eukaryotic type
  Zinc finger
   Cys4 GATA-factors
    107412330
Chromosome and associated proteins [BR:zju03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    107412330
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII ADD_ATRX
Other DBs
NCBI-GeneID: 107412330
NCBI-ProteinID: XP_024926483
UniProt: A0A6P6FXF8
LinkDB
Position
10:complement(join(24604854..24605226,24605476..24605744,24605820..24605898,24606659..24606862,24607379..24607605,24607896..24607957,24608681..24608813,24608899..24609202,24609288..24609343,24609452..24609601,24610577..24610718,24611638..24611804,24612907..24613026,24613308..24613523,24613602..24613692,24614260..24614549,24615206..24615742,24616649..24616732,24617415..24617528,24617614..24617860,24617942..24618132,24618576..24618644))
AA seq 1374 aa
MATFVEEWEAVLNELETESSHLLEQLDGAGIELPSLYKYMESQAPNNCVTEAWKRRIHWV
GSQATGDFTESKDGAEEYLQKHRPVRRRHGKLLEEGASGFLQKKLAINGSTDTVKENSEV
DWSSLNKLFSEGANEDCVSFGSKCWSSVYLASTPQQAAEMGLKFPGVDEVEEIDDVDGNS
TDPYVAAAVANEKELALSEEQKKKYKKVKEEDDASIDKKLQIHLKRRRYRKKCKQGAGQK
EVCSDDCVIENDIRKCPSPVDCPASVLNKKSSEDGENMPNNDVPNGFEHSNNVDIGSITN
SSSSMPSDSMSKHLSESEELTLEKKRSRTVIIESDDEAQVKDSVSKKVKLEDQSDLKENT
GGSVADSLPSQNVTEKFHCTACNKMVIEVHSHPLLKVIICADCRGVMAEKMQMKDADCSE
CYCGWCGQSIDLVNCKSCKTLFCMACIKRNIGMECLTEVQTSGWHCCCCRPSLLQRLTLQ
LEKAMGFGGVVVSSSDSDSDNSDTDIDVAISSKRKRKKKIRRILDDAELGEETKRKIAIE
KERQERLKSLQVQFSTQSNMTSSTSYNGNLSEDASTEVLGDASTGYIVNVVREKGEEAIR
ILPSISAKLKAHQVAGIRFMWENIIQSITKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT
AMRSVDLGLRTALIVMPVNVLHNWRQEFMKWRPSEVKPLRVFMLEDVSRERRGELLAKWR
AKGGVFLIGYSAFRNLSFGKNVKDRNIAREICHALQDGPDLLVCDEAHVIKNTRADVTQA
LKQVRCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTL
DDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFIVAVKLSPLQRKLYKRFLDVH
GFTNDQISNEKMRKRSFFAGYQALAQIWNHPGILQLRRDKDYVRREDVVDNFLVDDSSSD
ENMDYNVVFGEKQKNSNEVMQGKIADSFFQKDWWNDLLHENNYRELDYSGKMVLLLDILA
MCSDVGDKVLVFSQSIPTLDLIELYLSRLPRNGKKGKSWKKGKDWYRVDGRTEASERQKL
VESFNDPVNKRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQNK
PVFAYRMMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDT
LNDLDQENGHASNQTKTGEVGNPAKQKVPLSNGSCSSDKLMESLLSKHCPRWIANYHEHE
TLLQENEEERLSKEEQDMAWEVYRRTLEWEEVQRVPLNESAVERKPTTSNVAPHAAEISS
RTISRARERVVLRKCTKLSHLLTLRSQGTKSGCSTVCGECAQEIRWEDLQRKAE
NT seq 4125 nt   +upstreamnt  +downstreamnt
atggctacttttgtggaagagtgggaggctgtgcttaatgagcttgaaacagagagttct
catttgttggagcaacttgacggagctggtattgagctaccaagtctctacaaatacatg
gaaagtcaggctcctaataattgtgttacagaagcttggaaaagacgaatacactgggta
ggatcacaggcaactggtgattttaccgagtcaaaagatggtgctgaggagtatttgcaa
aaacacagacctgtaagaaggcgacatggtaaactattggaggagggggctagtggattt
ctgcaaaagaaactggctattaatggaagcacagatactgtaaaagagaattctgaggtt
gactggtcttctctgaacaaactgttttctgaaggagcaaatgaggactgtgtttcattt
ggtagtaagtgttggtcttctgtttacttggccagcacaccacagcaggctgcagaaatg
ggtctcaaatttcctggtgtcgacgaggtggaggagattgatgatgttgatggaaattct
actgatccatatgttgcagctgcagttgcaaatgaaaaagaattggctctttctgaagaa
caaaagaaaaaatacaagaaggtcaaagaagaagatgatgcaagtattgataagaagctt
caaattcatttgaaaaggaggagatatcgaaagaaatgcaaacagggggctggtcagaag
gaagtttgctcagatgattgtgtgatagaaaatgatatccgcaagtgtccatctccagtt
gattgtcctgcctctgtcttgaataagaaaagttctgaagatggagaaaatatgcctaac
aatgatgtgcctaatgggtttgaacattctaacaatgttgacattggaagcataacgaac
agtagttcctcaatgccatccgactccatgtccaaacatctgagtgagagtgaggagcta
accctagagaagaagagaagtcgaactgttattatagagagtgatgacgaagctcaggtg
aaggattcagtctctaaaaaggttaaattagaggatcaatctgatttgaaggaaaatact
ggtggctctgttgctgactctcttccttcacagaatgtgactgaaaagtttcactgcact
gcttgtaacaaaatggttattgaggtgcactcacatccacttctgaaagttatcatttgt
gctgattgcagaggtgtaatggcagaaaagatgcaaatgaaggatgcagattgctccgag
tgttattgtggttggtgtggacaaagcattgacttagtgaattgtaaatcatgtaaaacg
ttattctgtatggcttgtataaagaggaatattggcatggagtgcttgaccgaggttcaa
acttctggctggcattgttgttgctgtcgcccaagtctcttgcaaagattgactttacag
ttagagaaagcaatgggttttggaggagtggttgtatctagctctgatagtgattcagac
aattcagacacagacatagatgttgctatcagctctaagaggaagaggaaaaagaaaata
cgaaggatcctcgatgatgctgaattaggagaagagaccaaaagaaaaattgctattgaa
aaggaacgtcaggaacgcttgaaatccttgcaagttcagttttctacacaatctaatatg
acaagttctacaagctataatgggaatttatcagaagatgctagcactgaggtgcttggt
gatgcatcaacaggttatattgtgaatgtcgtgagggagaaaggtgaagaagctattaga
attcttccaagtatttcagcaaaattaaaagcccatcaggttgcaggaataagatttatg
tgggaaaatatcatacagtcaatcacaaaggtgaagtctggggataaaggtcttggttgc
attctagctcatacaatgggccttggtaaaacttttcaggttatagcttttttgtacact
gccatgagaagtgttgatttgggtttaagaactgcacttattgtcatgcctgtgaatgta
ctgcataattggcggcaagagttcatgaagtggagaccttctgaagtaaagccactgcgt
gttttcatgctagaagatgtctcaagggagagaagaggagaattgcttgcaaagtggaga
gctaagggcggtgtcttcttgattggctacagtgcttttcggaacttatcctttggaaag
aatgtgaaggatcggaacatagcgagggaaatttgccatgccttgcaggatggacctgat
ttactcgtatgtgatgaggcccatgtgattaagaatactagagctgatgtaacccaagcc
ttaaaacaagtgagatgccaaagacggatagcattaactggatcacctctacagaacaat
ctcatggaatattattgtatggttgattttgtaagggaaggttttcttggaagcagtcat
gaatttagaaaccgcttccaaaatcccatagagaacggtcaacatactaactcaactctg
gatgatgtgaaaataatgaatcaaagatctcatatcctctatgaacagttgaagggcttt
gtgcaaagaatggacatgaatgtggtgaagaaggatttaccacctaaaactgtctttata
gtagctgtaaagctttctcccttgcagaggaaattatacaagagatttcttgatgtgcat
ggatttaccaatgaccagatctctaatgagaagatgaggaagagaagtttttttgctggg
taccaggccttagcacagatatggaatcatcctggtatcttgcaattgagaagagacaag
gactatgttcgacgtgaagatgttgttgataattttcttgtggatgacagctctagtgat
gaaaacatggactataatgtggtctttggagagaagcagaagaattcaaatgaagttatg
cagggaaaaattgctgatagctttttccaaaaggattggtggaatgatcttcttcatgaa
aataattatagagagcttgattacagtgggaaaatggttttgctgctggacattctagct
atgtgttctgacgtgggtgataaggtgttggttttcagtcagagcataccaacccttgat
ttaatagaactttatctttcaagactacctcgaaatgggaagaaaggaaaatcttggaag
aaaggaaaagactggtatagggtagatggaagaacagaggcctcagaaaggcaaaagctg
gttgagagctttaatgatcccgtaaataagagagtgaaatgcactctgatttcaaccaga
gcaggatctctagggataaatcttcatgctgctaaccgtgtagtcatagttgatggttct
tggaatccaacctatgatcttcaggctatatatcgagcttggaggtatggccaaaacaag
ccagtttttgcttatagaatgatggcacatggaactatggaagaaaagatttataaacgt
caggtgacgaaggaggggcttgctgcaagggtggtggatagacaacaggtacacaggacc
atctccaaggaagagatgttacatctctttgagtttggtgatgatgagaaccctgacact
ttgaatgatctggatcaagaaaatgggcatgccagtaaccaaactaagactggagaagtt
gggaatccagccaagcaaaaagtgcctctttctaatggaagttgctcttctgacaaacta
atggaaagtttacttagcaagcattgtccaaggtggattgctaattatcatgaacatgag
acgctattacaagagaatgaagaagaaaggctctcaaaggaggaacaagacatggcttgg
gaggtataccggagaacattagaatgggaggaagtgcaacgagttcctcttaacgagtct
gcagttgagcgaaagccaacaacatcaaatgttgccccacatgcagcagaaataagcagc
cgtacgatatctagggctagggaacgtgtagtgctacggaaatgcactaaactttcacat
ttgctgacccttagaagccagggaacaaaatctggttgttctactgtgtgtggggagtgt
gcccaggagataaggtgggaagatctacaacggaaggcagagtaa

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