KEGG   Ziziphus jujuba (Chinese jujube): 107412440
Entry
107412440         CDS       T04794                                 
Name
(RefSeq) RNA-binding protein Y14
  KO
K12876  RNA-binding protein 8A
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03013  Nucleocytoplasmic transport
zju03015  mRNA surveillance pathway
zju03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107412440
  09122 Translation
   03013 Nucleocytoplasmic transport
    107412440
   03015 mRNA surveillance pathway
    107412440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zju03019]
    107412440
   03041 Spliceosome [BR:zju03041]
    107412440
Messenger RNA biogenesis [BR:zju03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     107412440
Spliceosome [BR:zju03041]
 Complex C
  Other components
   EJC/TREX
    107412440
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 107412440
NCBI-ProteinID: XP_048324807
LinkDB
Position
10:join(27118646..27118931,27119717..27119853,27121095..27121249,27121503..27121551)
AA seq 208 aa
MANADVEAVDFEPEEDDLMDEDGAADADASASPRAPLPKLKSAITSGGGASSSLGPPKKT
KGRGFREDINADRNSRLAGSDFDSLKSSDGLEPQRSIEGWIILVTGVHEEAQEDDLQNSF
GEYGEIKNLHLNLDRRTGFVKGYALIEYENFEEAQAAIAGMNGAEFLTQTVTVDWAFSNG
SFLDGSMKKRNIRQQRERRSRSPPRRRY
NT seq 627 nt   +upstreamnt  +downstreamnt
atggcgaacgcagacgtagaggcggtagacttcgagccggaggaggacgacctcatggac
gaggacggagctgcagacgccgatgcctccgcttccccgagagcccctcttccaaagctc
aagtccgctatcaccagcggcggcggcgcttcctcctctcttggccctcctaagaagacc
aagggccgtggcttccgtgaagatatcaatgccgaccgaaactcccgtcttgccggctcc
gatttcgactctctcaagtcctccgacggccttgagccccagcgctccattgaaggttgg
attattctggtaactggagttcatgaggaggcacaagaggatgatctacaaaattcattt
ggtgaatatggagagatcaagaatttgcatctaaatcttgatcgtcgcactgggtttgtc
aaggggtatgcacttattgaatatgagaattttgaggaagcacaagctgcaatagccggg
atgaatggcgctgaatttcttactcagactgtaactgttgactgggccttcagcaatgga
tccttccttgatggatctatgaagaagaggaacattaggcaacaacgagagcgtcgctca
aggagccctccaaggaggagatattga

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