KEGG   Ziziphus jujuba (Chinese jujube): 107412535
Entry
107412535         CDS       T04794                                 
Name
(RefSeq) endoribonuclease Dicer homolog 2 isoform X2
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:zju00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zju03036]
    107412535
Chromosome and associated proteins [BR:zju03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    107412535
   microRNA pathway
    RISC loading complex
     107412535
SSDB
Motif
Pfam: Ribonuclease_3 Ribonucleas_3_3 Helicase_C Dicer_dimer DEAD PAZ ResIII Cas3-like_C_2 dsrm SNF2-rel_dom SWI2_SNF2
Other DBs
NCBI-GeneID: 107412535
NCBI-ProteinID: XP_015875809
UniProt: A0A6P3ZDM6
LinkDB
Position
10:complement(join(26955043..26955393,26955617..26955895,26956217..26956627,26957345..26957554,26958289..26958485,26959241..26959344,26959557..26959975,26960063..26960337,26960506..26960720,26960876..26961094,26961322..26961482,26961568..26961763,26962212..26962311,26962409..26962538,26962625..26962750,26962895..26963035,26963512..26963576,26963673..26963757,26964054..26964188,26964364..26964477,26965035..26965212,26965624..26965694))
AA seq 1393 aa
MEPVSMEIDGSQQLSADSLPFARNYQLEALEKAIKQNTIVYLETGSGKTLIAIMLLRTYA
HLLRKPSPYIAVFLVPKVVLVSQQGEAVKMNTDLNVGMYWGDMGVDFWNAELWKKEIDKH
EVLIMTPAILLDGLRCSFFKLSMIKVLILDECHHAKGNDPYACIMKEFYHHQLYSGKSDL
PRIFGMTASPIKTKGGATDVSYRKAIQELENLMHSKVYTCANESVLSEFIPFSTPKFKFY
RHKEIPYALYEHLTKELTILKDKHQLSLKILDDEAAVESMCKKIMKVFSAFEFCLGELGV
WLAVKAAKSFSCNAIDHFLWEKPDLLGDRIVKNFSLDVCTKFSAFLPTNPAWTIGDDVKG
NVDAGLMTEKVLCLIESLLEYRDLNDLRCIIFVERVITAIVVQSLLSEFLPKHNNWKTKY
MAGNHNGLQYQTRKLQNEIVDEFRKGMVNIIVATSILEEGLDVQSCNLVIRFDPSATVCS
FIQSRGRARRQNSDYILMVKSGDLSTYSRLEKYLGSGEIMRKESLSHASLPCSPVESDLC
DGYFYCVESTGAIVTLHSSVRLIYFYCSRLPSDEYFKPTPRWDNETCTLHLPKSCPLPAI
HAQGNVKILKQIACLEACKKLHQIGALTDNLVPDTVVEEDDAQETGSQQYDDEQPSYIPV
EMVRPFIPKDASILYHCYRIELKQNFEYETPVHDVVLCMRSELDYDIANLKFDLQVDRGS
LSVSFKYEGVISLNHKQVMVSRRFQITLFRMLMDHNLAKLREDLDGLDLGENLEIDYLLL
PATSVDQRPFVIDWRSVTSVLFSCEEYEKDHINCSLPKYLHTKDGLRCACMLKNSLVYTP
HNNHVYCITDILNLNGNSLLKLKNGRNIPYKNYYEERHGINLWFEKESLLNGRKVFKVQN
CLLRCKQRKERESSNMSVELPPELCSIIMSPISLSTFYSFSFVPSIMHRVESLLLAVNLK
RMLLDHCTQNVVIPTIKVLEAITTKECQEVFHLESLETLGDSFLKYAASQQLFKTYHNLH
EGLLSAKKDKIISNAALCIRGCNRKLPGFIRNESFDPKKWFIPGDNSTNKSIKEEYLFNT
KKIYISGKRKVKCKRVADVVEALIGAFLSTGGEVAAVMFLDWLGINVDLVHVPYERNFAV
QPEKHINIRHLESQLNYSFNDPSLLVEALTHGSYMLPQIPRCYQRLEFLGDAVLDYLITI
HLYYKFPGLSPGLLTDMRSAQVNNDCYARCSVKAGLHKHILHLSRHLHKHIAETIDNFGK
LSSESTFGWETETSFPKVLGDVIESLAGAIFVDSGYSKEKVFESIRPLLEPLVTPETVKQ
HPAKELNELCQQMHYDMKKPVKCSGRGQTSVTIEVKANGVTYKHTEKSSDKDIAKKVACK
KVLKALKQANSLN
NT seq 4182 nt   +upstreamnt  +downstreamnt
atggaaccagttagcatggagatagacggatcccagcaactatcggctgattctctcccg
tttgccagaaattatcagttggaagcattggaaaaagctatcaagcagaacactatagtt
tacttagagactggctctggcaaaactttgattgccatcatgcttcttcggacctacgcc
catcttctccgaaagccttcaccttacattgctgttttcttagttcccaaagttgtcttg
gtctctcagcaaggtgaggctgtaaaaatgaataccgatttgaatgttggtatgtactgg
ggagatatgggagttgacttctggaatgctgaattgtggaaaaaagaaattgataaacac
gaggtgcttataatgacacctgcaatattgcttgatggtttgcggtgtagctttttcaaa
ctgagcatgataaaggtcttaatacttgatgaatgtcaccatgccaagggtaatgatcca
tatgcttgcattatgaaggagttttatcaccatcagttatattctggtaaatctgatctt
cccagaatatttggaatgactgcctcacccataaaaacaaaaggtggagcaacagacgtc
tcctaccggaaagcaattcaggaactggaaaacctgatgcactcaaaggtgtatacatgt
gctaacgaatctgtgctttctgagtttataccattttcaactccgaagttcaagttttat
aggcataaagaaatcccatatgccttgtatgaacatttaacaaaggaactgacgatttta
aaagataagcatcaattatccctgaaaattttggatgatgaagccgctgtagaatcgatg
tgcaaaaagataatgaaggtgttttcagcttttgaattttgtctgggtgaacttggtgtc
tggctagctgtgaaggctgcaaagtccttctcttgcaatgcaattgaccattttctgtgg
gagaaaccggatttattaggtgacagaatagttaaaaatttcagtttggatgtctgtacg
aaattttctgctttcctgccaaccaatccagcttggacaattggtgatgatgtaaaaggg
aatgttgatgcagggcttatgactgagaaagttttatgtctcattgaatcgcttcttgaa
tacagggacttgaatgatttaagatgtataatttttgtggaaagggtcatcacagccatt
gttgtccaatctttattaagtgagtttcttccaaagcataataattggaaaacaaaatac
atggctgggaatcataatgggctgcagtaccaaacaagaaaattacaaaatgaaattgtg
gatgaattccggaaaggcatggtgaacatcattgttgcaacatcgattcttgaggagggt
ttagatgttcaaagctgcaatttggttattagatttgacccttctgccactgtttgtagt
ttcatacagtccagaggccgtgctaggaggcagaattctgattatatattaatggtgaag
agtggggatctcagtacatattccagactagagaaatatcttggtagtggagaaattatg
aggaaggagtctttaagccatgcttcccttccatgctcacctgttgaaagtgatttgtgt
gatggatacttttattgtgttgaaagtactggagccattgtaaccctgcattcaagtgtt
agattaatatacttctactgttcaaggctcccttccgatgagtatttcaaaccaacccca
aggtgggataatgaaacttgcaccctccaccttcccaagagctgtccattaccagctatt
catgcacaggggaatgttaaaattcttaagcagattgcatgccttgaagcatgtaagaaa
cttcatcagattggtgctttaactgataatcttgttccagatacggttgtggaagaagat
gatgcacaagagactgggagtcagcaatatgatgatgagcaacccagttatattccagtt
gagatggtcagaccctttattccaaaggatgccagcatattgtaccattgctacagaatt
gagctgaagcaaaattttgaatatgagactccagtccatgatgttgtgctttgcatgaga
agtgagttggattatgacattgcaaatttgaagtttgacttgcaagttgacagaggcagt
ttatcagtgagctttaaatacgaaggggttatttctcttaaccataagcaggtgatggtg
tccagaaggtttcaaatcactctcttcagaatgcttatggatcataacttagcaaaactg
agggaagatttagatggacttgatttgggagaaaatcttgagattgattatcttcttctc
ccagccaccagcgtagaccaaagaccttttgtaattgactggagatctgttacctctgta
ttattttcatgtgaagaatatgagaaggatcatataaattgttctttacccaagtattta
catacaaaagatggtcttcgttgtgcttgtatgctcaagaattctttggtttatacgcct
cataacaatcatgtttattgcatcactgatattttgaatctgaatggaaactcgcttcta
aagcttaagaatggaagaaatattccatacaagaactattatgaagaacggcatggtatc
aacttatggtttgagaaagaatcactacttaatggcagaaaagtcttcaaagtgcagaac
tgtcttttaaggtgcaaacaacgaaaggaaagagaatcaagtaacatgtctgttgaattg
ccacctgaactctgctccattatcatgtcacctatatcgttaagcactttctattccttc
tcatttgtaccatcaataatgcatcgggttgaatctttactccttgctgtcaatttgaaa
aggatgcttttggatcattgcacgcaaaatgttgtcattccaaccatcaaggtcttggaa
gctattaccacgaaagaatgccaagaggtgttccatttggaatctttagaaactcttgga
gattcatttctcaaatatgctgctagtcaacagctttttaaaacctaccataatcttcac
gagggccttcttagtgcaaagaaagataaaataatttctaatgccgccctatgtatacgt
ggatgcaaccgcaaacttccgggcttcattcgtaacgagtcttttgatcctaagaagtgg
tttataccaggagataattctacaaataaatcaattaaggaggagtatctatttaataca
aagaaaatttacattagtggaaaaaggaaggtaaaatgtaagagggttgctgatgttgtt
gaggcactaattggtgcattcctcagcacaggtggtgaggtagctgccgtaatgtttttg
gattggcttggtataaatgttgaccttgtccatgtaccatatgaaagaaattttgcagtg
caacctgagaagcatattaatatcaggcatttagagtcacagctgaactactcattcaat
gatccttctctgttagttgaagcactgacccatggttcttacatgcttcctcagattcca
agatgttatcagcggctagaatttctgggagatgctgtcttggactatctcatcactata
catctgtactataaatttcctgggttatcaccaggattgttaactgacatgaggtctgct
caagtgaacaacgactgttatgcacgatgttcagttaaggctggattgcataagcacatt
cttcatctctcacgtcatctccacaagcacatcgctgaaacaattgacaattttggaaag
ttgtcttcagaatcaacatttgggtgggaaacagagacatctttccccaaggtactgggg
gatgttatagagtctctggcaggggcaatttttgtggattctggatatagcaaagaaaaa
gtgtttgagagtataagacctcttttggagccattggttacgcctgaaacggtgaagcaa
catcctgcaaaagagttgaatgaactttgccaacaaatgcattatgacatgaaaaaacca
gtaaagtgcagtgggagaggacagacttccgtaacaatagaggtcaaagctaatggggta
acttacaaacacacggagaaatcctcagacaaggatatcgccaaaaaagttgcttgcaaa
aaggttttgaaggctctgaaacaagccaattctctgaattaa

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