Ziziphus jujuba (Chinese jujube): 107413341
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Entry
107413341 CDS
T04794
Name
(RefSeq) elongator complex protein 2
KO
K11374
elongator complex protein 2
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zju03016
]
107413341
Transfer RNA biogenesis [BR:
zju03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
107413341
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_2nd
EIF3I
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR41
NBCH_WD40
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
107413341
NCBI-ProteinID:
XP_048318257
UniProt:
A0ABM3I0R2
LinkDB
All DBs
Position
12:complement(join(21693289..21693423,21693619..21694103,21694826..21695003,21695184..21695404,21695541..21695865,21696039..21696713,21696808..21696968,21697680..21697833,21698178..21698263,21698535..21698622,21698727..21698882))
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AA seq
887 aa
AA seq
DB search
MSRSGSDGGGEVEVKRVFIGAGCNRVVNNVSWGACGLAAFGAQNAVVIFCPQTAQILTTL
PGHSASVNCTQWFPSAKFAFKAKHLERHYLLSGDADGTIILWELALLSGKWRHVLKVPES
HKKGVTCFTGIMVSETVAIFASTSSDGTVHVWEVTFPSTNEGDCRLLSLESLSVGSKPMV
ALSLAELPGNTEHLVLAMGGLDNKIHLYCGKRTGKFIHACELKGHTDWIRSLDFSLPIWT
NGEAKNILLVSSSQDRGIRVWKMALRGFSGNYLGAIRKEGISLASYIEGPVFVAGTSSYQ
VSLESLLIGHEDWVYSVEWQPPTVAAGEGIAHQPQSILSASMDKTMMIWQPEKTSGIWMN
VVTVGELSHCALGFYGGHWSANGDSILAHGYGGSFHLWKNVGVDFDNWQPQKVPSGHFAA
VADIAWARSGEYLLSVSHDQTTRIFAPWQHEATSLSGGDSWHEIARPQVHGHDINCATII
QGKGNHRFVSGADEKVARVFEAPLSFLKTLNHAISQKSGFCEDLQLGVQILGANMSALGL
SQKPIYVQEAENETADRNGSDSYDTLETIPDAVPVVLTEPPIEDQLGWHTLWPESHKLYG
HGNELFSLCCDHRGNLVASSCKAQSATVAEIWLWQVGSWKAVGQLHSHSLTVTQMEFSYD
DKLLLSVSRDRQFSVFNIEKTGTTDEISYQLLAKQEAHKRIIWACSWNPFGHEFATGSRD
KTVKIWAVENQSSVKPLLTLPLFKSSVTALSWVGLDSKKNNGLLAIGMENGLIELWSLSI
NRTGDGNIAVLGATAAPVARLDPVMCHASAVNRLAWRNPEKNEDFSSMQLASCGADNCVR
VFDATSHAIVDKNLANCNFGPEETSIRDTAAEEEKKCILPRLARWQS
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaagcggcagtgatggtgggggcgaggtggaagtgaagagggtgttcatagga
gcaggatgtaacagagtagtcaacaacgtttcatggggtgcctgtggtttggcggccttt
ggtgctcaaaacgctgtcgttattttctgcccgcagactgctcaaattctgacgacgctt
ccgggtcattcagcttctgtgaactgcacccagtggttcccaagtgctaagtttgctttt
aaagctaaacacttagagcggcattacctcctttctggagacgctgatggcaccattatt
ttatgggaattagctctgctttccgggaagtggaggcatgtattaaaagtaccagaatcg
cacaagaagggtgtcacatgctttactgggataatggtatcggaaactgtggcaatcttc
gcgtctacttcttcagatggtactgttcatgtatgggaggtgacttttccatctactaat
gaaggtgactgtagattgttgtctctggaatctctctctgttggttcaaaacctatggta
gcactgtcattggctgagttgcctggaaatactgaacatttagttttggcaatgggagga
ttggataacaaaattcatctatattgtgggaagaggacaggaaagtttattcatgcttgt
gagttaaaagggcacacagattggattcgaagcttggatttctcattacccatatggacc
aatggtgaagcaaaaaatattcttcttgtaagttcatctcaggatcggggcatacgcgta
tggaagatggctctacgtggtttttcaggcaattaccttggtgcaattaggaaagaagga
attagtctagcatcttatatagagggccctgtatttgttgctggcacatcctcatatcaa
gtatctttggaatctctgctaatcggacatgaagattgggtgtattcagtggaatggcaa
cctccgacagttgcagctggagaaggtattgctcaccaaccccaaagcatattatctgct
tcaatggacaagacaatgatgatttggcaaccagaaaaaacttctggcatctggatgaat
gttgttactgttggggagttaagtcattgtgcactagggttttatggtggtcactggagt
gcaaatggagattcaattttagcacatggatatggtgggtcttttcatctctggaaaaat
gttggtgttgactttgataattggcaaccacaaaaggtcccatctgggcactttgcagca
gtggcagatattgcatgggcaagatctggtgaatatttgctgtctgtcagtcatgaccag
acaactcgaatttttgctccttggcaacatgaagcaacttctctcagtggtggggattcc
tggcatgaaattgcacgccctcaagttcatggacatgatattaactgcgcaaccattatc
caaggaaaggggaaccaccgttttgtcagtggagctgatgagaaagttgccagagtattt
gaggctcctttgtctttcttaaagacacttaatcatgccatttcacaaaagtctggcttc
tgtgaagatcttcaattaggtgttcagattttgggtgcaaacatgtctgctcttgggcta
tctcagaaacctatttatgttcaggaagctgagaatgagactgctgacagaaatggcagt
gattcatatgacacccttgaaacaattccagatgcagttccagtagtgttgactgaacct
cccattgaagatcaactgggatggcatacactgtggccagagtcgcacaaactttatggt
catgggaatgagctgttttccctatgctgtgatcatagggggaatcttgtagcctcatca
tgtaaggctcaatcagcgacagttgcagagatatggctatggcaagttggttcatggaag
gcagtaggtcagttgcattctcatagcctgacagtgacacagatggaattctcttacgat
gacaaattgcttttatctgtttcaagggatcgccagttctctgttttcaatatcgaaaag
acaggtactactgatgaaataagctaccagcttctagcaaagcaagaggcacacaagaga
attatatgggcatgttcttggaatccatttggtcacgagtttgcaacaggttccagggac
aagacggtgaaaatttgggcagtggaaaatcaatcttcagttaagcctcttttgactttg
ccgctgtttaaaagtagtgtcactgcactatcttgggttggtcttgatagcaagaaaaac
aatggtttattggcaattggaatggaaaatggactcatcgaattatggagtctttccata
aacagaactggtgatggaaatatagcagtactaggtgcaaccgccgctcctgttgcccgg
ctcgatccagttatgtgccatgcatctgcagtaaatcgtttggcatggaggaaccctgag
aagaatgaagatttcagcagtatgcagcttgcttcttgtggagcagacaattgtgtgaga
gtgtttgatgccaccagccatgcaatagttgacaaaaaccttgcgaattgtaattttgga
ccggaagaaacatctatcagggacacagcagcagaagaagaaaaaaaatgtattctacca
cgtttggcaaggtggcagagttaa
DBGET
integrated database retrieval system
