Ziziphus jujuba (Chinese jujube): 107413417
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Entry
107413417 CDS
T04794
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zju04131
]
107413417
04121 Ubiquitin system [BR:
zju04121
]
107413417
Enzymes [BR:
zju01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107413417
Membrane trafficking [BR:
zju04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
107413417
Ubiquitin system [BR:
zju04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107413417
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
Zn_ribbon_GTF2H2
zf-RING-like
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
107413417
NCBI-ProteinID:
XP_015876849
UniProt:
A0A6P3ZFR9
LinkDB
All DBs
Position
8:11304902..11306083
Genome browser
AA seq
393 aa
AA seq
DB search
MSSHWCYRCSRFVRVSNDEAVVCPDCDSGFVEEIDNPPRAVHVDSRRRRFPAAAMYMIGA
HRGGSNSDRNNSGPGLRRTRRNGGDRSPFNPVIVLRGSSSDGANGDGGSEGRGFELYYDD
GAGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEINGIGRCEQPPASKAAIESMPTIEIDD
SHVSNEPHCAVCKEAFELGTEAREMPCKHIYHSDCILPWLSLHNSCPVCRHELPADTQNS
SESENGQSLLSNEDENVGLTIWRLPGGGFAVGRFSGGRRGGERELPVVYTEMDGGFNSGG
VPRRISWSSRGRRGRDRGGLRRVFRNFLACFGGMGSSSASSSASSSDTRSRRSTTTRTTP
ARRATSLSNLDATTIPRTRRTWSMDVNSGIVRW
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctcactggtgctacagatgcagtcgattcgttagggtttcgaacgacgaagcc
gtggtctgcccagactgcgacagtggattcgtggaggagatcgacaaccctcctcgagcc
gtgcacgtggactcgcggaggaggagattccctgcggccgccatgtatatgatcggagct
caccgcggcggttccaattcagatcggaacaactcaggtcccggactcagaaggactcgg
aggaacggcggcgaccgttctcctttcaacccagtgatcgtgcttcgcggatcgtcgtcg
gatggagctaacggcgatggcggttcagagggacgtgggttcgagctctattacgacgac
ggtgctggatcgggtttgagacctttgccgccgagcatgtcggagtttctattggggtct
ggattcgaccggcttttagagcagctttctcagatcgaaatcaacggtatcggacggtgc
gagcagccaccggcatccaaagctgcgatcgagtcgatgccgacgatcgagatcgacgat
tctcacgtctcgaatgaaccgcactgcgccgtgtgcaaagaagctttcgaattgggaacc
gaagctcgagaaatgccctgtaagcacatataccattccgattgtatccttccatggctg
tctcttcacaattcctgccctgtttgtcgccacgagttgcccgctgatacccagaacagc
tccgagtcggaaaatggtcagtctttgctttccaacgaagatgaaaacgtgggtttgaca
atttggaggctacctgggggtggattcgctgtgggaaggttctctgggggaagaagaggg
ggtgagcgtgagcttcctgttgtttacacggagatggatggtgggtttaacagtggcggt
gttccgagaaggatttcgtggtcgtcgagaggtagaagagggagagacagaggtgggttg
agaagggtttttcgaaatttccttgcttgctttggtgggatgggttcttcttcggcgtct
agctctgcctcatcttcggacactcggagccgaaggtcaacaacaactagaacaacgccg
gcgaggagggctacatcgttgtcaaatttggatgcgaccacgatacctcggacgcgcaga
acatggtctatggatgtcaacagtggtattgtaagatggtga
DBGET
integrated database retrieval system
