Ziziphus jujuba (Chinese jujube): 107413507
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Entry
107413507 CDS
T04794
Name
(RefSeq) THO complex subunit 4B
KO
K12881
THO complex subunit 4
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03013
Nucleocytoplasmic transport
zju03015
mRNA surveillance pathway
zju03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107413507
09122 Translation
03013 Nucleocytoplasmic transport
107413507
03015 mRNA surveillance pathway
107413507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zju03019
]
107413507
03041 Spliceosome [BR:
zju03041
]
107413507
Messenger RNA biogenesis [BR:
zju03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107413507
TREX complex
107413507
Spliceosome [BR:
zju03041
]
Complex C
Other components
EJC/TREX
107413507
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107413507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
107413507
NCBI-ProteinID:
XP_015876952
UniProt:
A0A6P3ZDI3
LinkDB
All DBs
Position
8:complement(join(12298422..12298581,12299384..12299568,12299676..12299744,12300268..12300393,12300712..12300924))
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AA seq
250 aa
AA seq
DB search
MADQLDMSLEDIIKKNKKTGGYNGNSATRGRAGGGGAARGRGGSSSGPGPERRFQNRNPA
RTTPYYTALHPLARFRGRMLMQPLGVSGQSDVEKSTKLYVSNLDYGVSNSDIKILFSDVG
ELKQYSIHYDRSGRSKGTAEVVFARHGDAVAAINKYNNVRLDGKPLKIEFVGGLVDAPTL
VPPTRNNKLERFNGSIRRGRQAGSRELTHGNFGHGNLRGRGQGRNQHERVTVEDLDAELE
CYRLQSMQIS
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccaactggacatgtctttggaggacatcatcaagaaaaacaagaaaaccggg
ggttacaatggtaattctgcaaccagaggcagagccggaggaggaggagcagctagaggc
cgtggtggctcttcttctggtcctggtccggagcgtcgctttcagaaccgcaatccggcc
agaacgacgccgtactatactgctctacatccgcttgcgcgcttcaggggacgaatgctg
atgcaaccattgggagtgagtggacagtctgacgtcgagaagagcaccaaattatatgta
tcaaacttggattatggggtttctaacagtgatatcaagatcctcttttctgatgttggc
gagttgaaacaatattcaatccattatgataggagtggaagatcgaagggaacagcagaa
gttgtctttgctcgtcatggagatgctgtagcagctatcaacaaatacaacaatgttcgg
cttgatggaaagccattgaaaattgagtttgttggagggctcgtggatgctccaactctt
gtacctccaactagaaataacaaactggaaagattcaacggttccatcagaagaggaaga
caagctggctctagggaattgactcatggtaattttggccatggaaatttaaggggtcgt
ggacagggaagaaaccaacatgaaagggtgacagtagaggatctggatgctgagttggag
tgctaccgtctgcaatctatgcagataagctaa
DBGET
integrated database retrieval system
