Ziziphus jujuba (Chinese jujube): 107413693
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Entry
107413693 CDS
T04794
Name
(RefSeq) auxin response factor 18
KO
K14486
auxin response factor
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107413693
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Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
107413693
NCBI-ProteinID:
XP_048326313
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Position
8:join(15992794..15993906,15994565..15995451,15995548..15995617)
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AA seq
689 aa
AA seq
DB search
MIAVMDSIKEPMMMKKKNSEKCLDPQLWHACAGGMVQMPPINSKVFYFPQGHAEHAQGSV
DFGNSRFPPLILCRVSGIRYMADTESDEVYAKIRLMPLRDSYYDVEDDGCLGNNGMVENN
PEKPSSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTILAKDVHGETWKFR
HIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLRADNGDLCVGIRRAKKGIGGGPEYPS
GWNSASGSCGSQYGGYSSFSREDEGKLMGRNCGRDLRARVKAESVVEAASLAANGQPFEV
VYYPRASTPEFCVKASAVRAAMQIRWCSGMRFKMPFETEDSSRISWFMGTISSVQVANPI
HWPDSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSSIPAIHMSPFSPPRKKLRLPQNPDF
SMVGQFPMPLISGNFLSSSSPMCCISDNIPAGIQGARHALFDPSPSDLHFNKLQAGLFPV
GFQQLDHAEPPRNPSGNFTQSTENSENISCWLKMGRPSESLKANNETKMPHILLFGQLIP
AEQQNSRSCSGENSSSDGNPDKTSNLSDGSGSALRQNGSVENSSDGGSPWYKDHRRTDIG
LETGHCKVFLESDDVGRTLDLSVLGSYQELYGKLADMFDIKSSEMLSNVLYRDAAGSIKH
TGDEPFSKFLKTARRLTILADSGSDNVGR
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgattgcagttatggattccattaaagaaccaatgatgatgaagaagaagaactctgag
aaatgcttggatcctcaattatggcacgcttgcgctggtgggatggttcaaatgccaccc
ataaactctaaagtcttctactttccacaaggtcatgcagaacatgcgcaaggcagcgtg
gatttcggtaattctcgattccctcctctcattctttgcagagtttctggaattagatac
atggcggatactgaatccgatgaggtttatgcaaaaataagattgatgccattgagagac
agttattatgatgttgaagatgatgggtgtttgggaaacaatggaatggttgagaataat
cctgagaaaccctcatcttttgccaagaccttgacacaatccgacgctaataatggagga
gggttttctgtccctcgttactgtgctgagactatattcccacggttggattatacggca
gaacctcctgttcagaccattcttgctaaggatgtacatggtgagacttggaagtttagg
catatttatagggggacaccacgccgtcaccttttgacgacggggtggagtaattttgtg
aaccagaagaagcttgttgctggggattccattgtgtttctgagagctgataatggggat
ctatgtgttggtataaggagggctaagaagggaattggtggtggacctgaatacccatct
ggatggaattctgcatctgggagttgtgggtctcagtatgggggttattcttcgttttct
agggaggatgaaggtaaattgatggggaggaattgtggcagggatttgagggcaagagtg
aaagctgaatctgttgtagaagctgctagtcttgctgccaatggccagccctttgaggtt
gtgtactatccccgtgccagcacgccggagttttgtgttaaggcttctgcagtgagggct
gcaatgcaaattaggtggtgctctgggatgaggttcaaaatgcctttcgaaaccgaagat
tcttcccggataagttggttcatgggaaccatatcttctgttcaggttgccaatcccatc
cactggcctgattctccatggcgtcttctacaggtagcatgggacgaaccggatttactc
cagaatgttaagcgtgttaacccatggttggttgaactggtatcgagcataccagccatc
catatgtctcccttctcaccacctagaaagaagttgagactaccacagaatccagacttt
tccatggtaggccagttcccaatgcctttaatttccggcaacttcctcagttccagcagc
cccatgtgttgtatttcggacaacattcctgcaggcatacagggagccaggcatgctcta
tttgatccatctccatcagatctccactttaacaagctgcaggcggggctgtttccggtt
ggttttcagcagcttgatcatgctgaacctcctagaaatcccagtggcaatttcacacaa
agcactgaaaatagtgagaacatttcttgctggctgaaaatgggtcgtccttctgagagt
ttgaaggcaaacaacgaaacgaagatgcctcacatcctattgttcggtcagcttattccg
gctgaacagcagaactctaggagctgctctggtgaaaacagctcatcagatgggaatcca
gataaaacatcaaatttgtccgatggctctggttctgcattgcgtcaaaatggttcggtg
gaaaattcttctgatggagggtctccttggtacaaagatcaccgaagaactgatattgga
ttggagactggtcattgcaaggttttcctcgaatcagatgatgtgggcaggacactagat
ctctcagtcctcggttcataccaagagctgtatggaaagctagctgacatgtttgatatc
aaaagctcagagatgttgagtaatgtgctctacagggatgcagcaggctccattaaacac
acgggagatgaacctttcagcaagtttttgaagactgcaagaaggctaaccattcttgcc
gattcaggcagcgacaacgtaggaagatag
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