Ziziphus jujuba (Chinese jujube): 107413862
Help
Entry
107413862 CDS
T04794
Name
(RefSeq) nuclear pore complex protein NUP88 isoform X1
KO
K14318
nuclear pore complex protein Nup88
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107413862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zju03019
]
107413862
Messenger RNA biogenesis [BR:
zju03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107413862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
Ezh2_MCSS
HisK-N-like
Motif
Other DBs
NCBI-GeneID:
107413862
NCBI-ProteinID:
XP_048325625
LinkDB
All DBs
Position
8:complement(join(20699154..20699464,20699853..20700102,20700776..20701696,20702082..20702298,20703054..20703115,20703814..20703958,20704719..20704841,20705204..20705355,20705769..20706074))
Genome browser
AA seq
828 aa
AA seq
DB search
MRLNFDLHETKPDHRTSRSSSSTPKDDVEWIPLQNHPVFASAATPVQDSTITASAPVTRS
LLAWDGASRLYFWDSNKLCLHRISIRLGDPDPTSVLAAFPSKVLQADVQLDFVVHKISIN
RNGSALFLSGSDGLCIMYLYGRASSKHNTMICRTVNVGSKIYFDGNNFIRVLQVLWHPYS
DTHLGILSSDSVFRLFDLSSDVIQPEQEYYLQPVEPGRCSNATSICPVDFSFGGDHLWDR
FTVFILFSDGSVYILCPVVPFGSIYRWESVMEIYSDAHAFGLKSSNPTAVGNSNLAISWL
EATFPELVDQALEGADLSSVRARPYALFDASLYLQGPLKKACQGEDEDGSFGGAECEGRA
VSFLYNVVSKDSIMVTAWSGGQLQVDALADEIQPIWNVGSPPRLRVDSYDQILGLAMICE
SIQSNHSIVKFDQPLENTVWLGHPPPLLRLAIVDLALPIKGESGSLITMFVDPLMPERIY
ALHDGGIDSIVLHFLPFTSQIGGKNDTMKTPSVHPVLSTCQGEVSSPSPLYGFVSLSDSF
GYSWIVGVTISQECFVLEMKTWDLLLPIHVDTVSRPIHMEELKEREMPDIISKELLSGPK
VVLAPQTSPNLRSVSADSIEGRSTLHQYFKLFHENYVEYAHKVHFELMYHGPHLKRIIDE
QHARLGEAEQKLLRVEGINSKLKERIDHVIKQHGVLEERLKRLQNLPGAHKKPLSRAERE
FKSELDQFRGVELDALRSSITALTARLRKHMPSPEGNESKLQTLISGRKNYVQDSQISQL
KSSLEKLSLVNTENTKKVKLVETALINTENTKKVKLFETALKDRESSR
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgaacttcgatcttcatgaaacgaaaccggaccaccggacaagccggtcgtcg
tcctccactccaaaagacgatgtggaatggattcctcttcagaaccacccggtcttcgct
tccgccgccactccggtccaggactccaccatcaccgcctcggctccggtgaccagaagt
ctcttggcctgggatggagcttcccgcctttacttctgggactccaacaaactatgcctc
catcggatctctattcggcttggagaccccgaccccacttccgtcctcgccgcatttccc
tctaaggttttgcaagcagatgtgcagctagactttgtcgttcacaaaatatctatcaat
aggaatggatcagcattattcctttcgggttcagatggtctatgtattatgtatctctat
gggcgtgcttcttctaaacacaataccatgatttgcaggactgtcaatgttggttcaaaa
atctacttcgacggcaacaactttatacgtgtccttcaagttttatggcatccttacagc
gatacccatttaggaattctttcttctgattcagttttcagactctttgatttgtcttca
gatgtcattcaaccagagcaagaatattatctacaacctgtggaaccaggtagatgcagc
aatgctacctcaatttgtcctgttgatttttcatttggaggtgaccacttatgggacagg
tttactgtctttattttgttcagtgatggttcagtttacatcctttgccctgttgttcca
tttggaagtatttacagatgggagtctgtaatggagatatacagtgatgcgcatgcattc
gggctgaaatcatccaatccaacagctgttggtaattctaatctggcaatttcatggttg
gaagcaacatttccagagttagtggaccaagcattggaaggggctgatctatcttcagta
cgagctcgtccttatgcgttatttgatgcatcactttacttgcagggccccttgaaaaaa
gcatgtcaaggtgaggatgaagatggaagttttggtggtgcagagtgtgaaggccgagct
gtcagttttctttacaatgtagtaagcaaagactcaattatggtgactgcttggagtggc
gggcagttacaagtagatgccttggctgatgaaatccagccaatttggaatgttggtagc
ccccctcgcctacgtgttgactcttacgaccagattcttggtcttgctatgatttgtgaa
tcaattcagagtaatcattcaattgtgaagttcgatcaaccacttgaaaatactgtttgg
ttggggcatcctcctcccttattgaggctggctattgtggacctagctcttccaattaaa
ggtgaaagtggttcccttattacaatgtttgtagatcctcttatgccagaaagaatttac
gcccttcatgatggagggattgattcaattgtgttgcattttctcccatttacaagtcag
atcggtggcaagaatgatactatgaaaactccctctgttcatcctgttttaagtacatgc
caaggagaagtatcatcaccatctccactttatggctttgtgtcactatcggattcattt
ggatattcatggattgttggagtcactatatctcaagaatgttttgtgctagagatgaaa
acatgggatctgttacttcctattcatgttgatacagtgagcaggccgattcacatggaa
gaactgaaagagagagagatgccagatatcataagcaaagaactgctaagtgggcctaag
gtggttcttgctcctcagacctcaccaaatctgcgttctgttagtgctgattctatagaa
ggtcgatccacacttcatcagtacttcaagcttttccatgaaaattatgtggagtatgca
cataaggtgcactttgagctcatgtaccatggacctcacttgaagagaatcattgatgag
cagcatgctcgtttaggtgaggctgaacagaagcttctgagagttgaggggataaattca
aagctgaaggagaggattgatcatgtaattaagcagcacggtgtcttggaagagcgcttg
aaacgtctgcagaacttgcctggggctcacaagaaaccactgtccagagctgagagagag
ttcaagtctgagcttgaccagtttagaggagttgagttggatgctttgcgttcttcaatt
actgctttaactgcaagattgagaaagcacatgccgtctcccgagggcaatgaatcaaag
ctacaaactcttatatctgggaggaaaaattatgtgcaagattctcaaatctcgcagctg
aaatcctcactcgagaagctttcacttgttaacactgagaatacaaagaaggttaagctt
gttgaaactgcacttattaacactgagaatacaaagaaggttaagctatttgaaactgca
ctaaaggaccgagaaagcagcagatga
DBGET
integrated database retrieval system
