Ziziphus jujuba (Chinese jujube): 107414030
Help
Entry
107414030 CDS
T04794
Name
(RefSeq) autophagy-related protein 18C
KO
K22991
WD repeat-containing protein 45
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zju04131
]
107414030
Membrane trafficking [BR:
zju04131
]
Autophagy
Other autophagy associated proteins
Others
107414030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
WD40
Beta-prop_IFT140_2nd
WD40_MABP1-WDR62_2nd
WDR55
BCAS3_WD40
Beta-prop_IFT80_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
107414030
NCBI-ProteinID:
XP_015877601
UniProt:
A0A6P3ZQG7
LinkDB
All DBs
Position
8:join(22394579..22395358,22395670..22395928,22396373..22396496,22397091..22397184)
Genome browser
AA seq
418 aa
AA seq
DB search
MTVNSSHMNSTISTSRGILPPTRVVSYESPEAGSSASFSQLEPDMNKDDETELLSVSWNQ
DYGCFAAGTSSGFRIYNCDPFKETFRRDLKSGGFKIVEMLFRCNILALVGGGANSQYPPN
KVMIWDDHQSRCISEFSFRSEVRAVKLRRDRLVVVLEHKIYVYNFTDLKLLHQIETLANP
RGLCCLSHHLNTSVLACPGLQRGQVRIEHFGLNMTKFINAHDSHIACFTLTMDGLLLATA
SNKGTLIRIFNTMDGTRLQEVRRGVEKAEIYSIVLSSNAQWLAASSDKGTVHIFSLRVRV
VGEDAYDNSSAAHGQALFHQNSSTSVDALISPNTGANPSSSLSFMRGVLPKYFSSEWSFA
QFHLPENTRFIVAFGSQNTVIIVGMDGSFYRCSFDPVQGGEMVQREYVRFLKTDIRPR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcaattcttcccacatgaattcaaccatttcaacgtctcgaggaatacttcca
ccaacaagggttgtctcttatgaatccccagaagctgggtcttctgcttcttttagccag
cttgaaccagatatgaataaggatgatgaaacagagttactttcagtctcgtggaatcag
gattacggttgctttgctgcagggacaagctctggatttcgtatctataactgtgatcct
ttcaaggaaactttcagacgtgatttgaagagtggaggatttaaaattgttgagatgcta
tttcgttgcaacatccttgcacttgttggtggaggagctaattcccagtatccaccaaac
aaagttatgatttgggatgatcatcagagccgctgcattagtgaattctcatttaggtct
gaggttcgtgcagtgaagttaagacgtgatcgtcttgttgttgttcttgaacataagata
tatgtttacaattttacggatctgaagctgcttcatcagattgagactctggcaaatcct
aggggattatgctgtctttcacaccatttaaatacatctgttttggcgtgcccaggactt
caacgaggacaggttcgaattgaacactttgggttgaatatgacaaagttcattaatgct
catgattctcacattgcttgcttcaccttaacaatggatggtctgcttcttgcaactgct
agtaacaagggcactttgataagaatcttcaacacaatggatgggactcgcctacaagag
gtacgtagaggggtggagaaagctgaaatttatagtattgtgctctcttccaatgctcag
tggttggcagcatcaagtgacaaaggtacagtgcatatattcagcctcagagttagagtg
gttggggaggatgcatatgataattcaagtgctgctcatgggcaagcgttgtttcaccag
aattcatcaacttctgtagatgctcttatttctccaaatactggtgccaatcctagttca
tcattgtcttttatgagaggggttttaccaaaatatttcagctctgaatggtcatttgct
cagttccacttgccagaaaacactcgattcattgtagcatttggatctcagaacactgtc
atcattgttggcatggatgggagtttctacagatgcagttttgatccagtgcaaggaggg
gagatggtacagcgggaatacgtacgcttcctgaaaacagatattcggccaagatag
DBGET
integrated database retrieval system
