KEGG   Ziziphus jujuba (Chinese jujube): 107414226
Entry
107414226         CDS       T04794                                 
Name
(RefSeq) structural maintenance of chromosomes protein 6B isoform X1
  KO
K22804  structural maintenance of chromosomes protein 6
Organism
zju  Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:zju00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zju03400]
    107414226
DNA repair and recombination proteins [BR:zju03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    SMC5-SMC6 complex
     107414226
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_15 CCDC39 AAA_29 AAA_21 SbcC_Walker_B ABC_tran EzrA
Other DBs
NCBI-GeneID: 107414226
NCBI-ProteinID: XP_015877817
UniProt: A0A6P3ZWB4
LinkDB
Position
8:join(23887724..23887865,23888120..23888225,23889570..23889703,23890898..23890953,23891814..23891900,23891978..23892298,23892946..23893065,23893539..23893673,23894300..23894376,23894461..23894536,23895985..23896059,23896163..23896267,23897775..23897944,23898053..23898155,23898287..23898399,23899008..23899212,23900158..23900289,23900380..23900494,23900627..23900712,23900859..23900954,23901355..23901488,23901585..23901687,23902660..23902739,23902837..23902915,23903044..23903101,23903298..23903395,23903583..23903677,23904230..23904287)
AA seq 1052 aa
MNDHISGAFHRPMAGVVKRIRLENFMCHSHLEIELGDSVNFITGQNGSGKSAILTALCVA
FGCRAKGTQRASTLKDFIKTGCSYANVHVEIKNEGEDALKPEIYGDVIIIERRISESTST
TVLKDHQGKRVTNKKEELRELVEHLNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFYKA
TLLQQVNDLLESIDQHLKSADGIICELEASIRPKEKELLELQEKIKNMEHVEEITQQVQQ
LKKKLAWSWVYDVEKQLQEQSFKIEKLKDRIPTCQSKINSQTDLVEELRAHFTKKKNQIA
SMMEKTSEVRRMKDELQQTLALATKEKLELKEEHSRKSNHIKKLVNRVRLLEQQVHDIHE
QHVKNTQAEESEIEEKVKELEHEVEVADSMLSRLKEEESVLLEILDQVVSEIRRIAEEIE
NCDKKNREISSLIRELNQHQTNKVTAFGGERVMNLLRAIERHHRRFKKPPIGPVGAHVTL
VNGDMWAPAVEHAIGNLLNAFIVTDHKDSLLLRTCAKEANYSYLQIIIYDFSRPRLNIPH
HMLPQTQHPTTLSVIHSENHTVLNVLVDMGHVERQVLVKDYDGGKAVAFDQRISNLKEVY
TLDGYRMFSRASVQTILPPNKKIRAPRLCSSFNDQIKNHERNASNVQEEAQQFRRRKREA
EEKLQNLQDKIKSVKRRCMNAERNVMEKKLALNDVKNSYAAEANVSPASTVDELHQEISK
VQEDIEEKKALLETFQVRMYEAESKARDLKVSFENLCESAKGEMDAFEKAEKDLTNIEQE
LHSAEANKVHYEGVMKKKVLPEIKEAEAQYQELKSLREDSFKKASIICPESEIEAIGWDG
STPEQLSAQITRLNQRLQQESHRFSESIDDLRMLYGKKERKIQRKQQSNKAFREKLSTCQ
RALEKRHTKFQRNARLLRRQLTWQFNNHLGKKGISGKIKISYEERTLSVEVKLPQDASSG
NVRDTRGLSGGERSFSTLCFALALHDMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALA
QGSQWIFITPHDISMVKQGERIKKQQMAAPRS
NT seq 3159 nt   +upstreamnt  +downstreamnt
atgaacgatcatatctccggcgcgtttcaccgtcccatggcaggcgtcgttaaaagaatc
cggctagagaacttcatgtgccacagtcacctggaaatcgagctcggcgactccgtcaat
ttcatcaccggtcaaaatggaagtggtaagagtgcgatacttactgctttgtgcgttgca
tttgggtgtcgagctaaagggactcaaagggcttcaacgttgaaggattttattaaaact
ggttgcagttatgcaaatgttcatgtagaaattaaaaatgaaggggaggatgctttgaag
ccagaaatatatggcgatgtcataattatagagcgtaggatttctgaaagtacaagcacc
acagttttaaaagatcaccaaggaaaaagggttacaaataagaaagaggagcttcgtgag
ctagtggagcatttgaatattgatgttgagaatccttgtgtaatcatgagtcaagacaaa
agcagagagtttttgcattctgggaatgacaaagataaatttaagtttttttataaggcc
acccttcttcagcaagttaatgatcttttggaaagcattgaccaacacttgaagtctgca
gatggtataatttgtgagttagaggcctcaataagacctaaagagaaggaactacttgag
ttgcaagaaaagattaaaaatatggagcatgtagaagaaataactcaacaggtacagcag
ttaaagaagaagcttgcatggtcctgggtatatgatgtagaaaagcaactccaggaacaa
agcttcaagattgaaaagctgaaagatcgtatacctacttgtcaatctaaaattaacagt
caaacagatctagtggaggaattgagggcacacttcaccaagaagaaaaatcagattgca
tctatgatggaaaaaacatcagaagtgaggagaatgaaggatgaattgcaacagactcta
gccttggctacaaaagagaagcttgaattaaaagaagaacacagccgcaaaagtaaccac
attaagaagctggtaaaccgtgttaggttgcttgagcagcaagtccatgatattcatgag
cagcatgttaaaaacacacaggctgaagaatctgaaatagaggaaaaggtgaaggaactt
gaacacgaggttgaagttgctgattcaatgctttcaaggttgaaggaagaagagagtgtg
ttattagaaatcttagatcaagtagtgtctgaaatccgaaggatagctgaggagattgaa
aactgtgacaagaagaaccgtgagatctcttctctcattcgtgagcttaatcaacatcaa
accaataaggttacagcgtttggtggagagagggtgatgaatctgttaagagcaattgag
agacatcatcgtagattcaaaaagcctccaattggtccagttggtgctcatgtgactttg
gttaatggtgatatgtgggctcctgcagttgaacatgccattggcaacttgctcaatgct
ttcattgtgacagatcataaagattctcttcttttgagaacatgtgctaaggaagcaaac
tatagctaccttcagattatcatttatgatttttcaagaccaaggttgaatataccacat
cacatgcttcctcaaacgcagcatccaactactctctctgttattcattctgaaaatcat
actgttctaaatgtcctagtggatatgggccatgtggagaggcaagttcttgttaaagat
tatgatgggggaaaagcagttgcttttgaccaaaggatctcaaatctgaaggaggtctac
accttagatggatatagaatgttttctcgtgcttctgtccaaacaatacttcctcctaac
aagaagattagagctccccgtctttgtagctcctttaatgaccaaatcaaaaatcacgaa
aggaatgcatcaaatgtacaagaagaagctcaacagtttaggaggaggaaaagggaggca
gaagaaaaacttcaaaatcttcaagataaaataaaaagtgtaaagaggaggtgtatgaat
gcagagcgtaatgttatggagaagaaactagcacttaatgatgttaagaattcatatgct
gcagaagcaaatgtgtcaccagcatcaactgttgatgagcttcatcaagaaatttcaaaa
gttcaagaggacatagaagaaaagaaagcattgctggaaacgttccaagtcagaatgtat
gaagctgaatcaaaggccagagatctcaaagtatcatttgagaatctatgtgaatcagca
aaaggagaaatggatgcctttgagaaagcagaaaaggatcttacaaatattgaacaagag
ctacattctgcagaagcaaataaggttcattatgaaggcgtaatgaagaaaaaggtcctt
cctgagatcaaggaggcagaggcgcaatatcaggagcttaaaagcctccgtgaggatagt
tttaagaaggcttctatcatttgtcctgagagcgaaattgaagcaataggttgggatggt
agcacccctgagcagctaagtgcccaaataaccagactgaaccagagacttcagcaggaa
agccacagattttctgaatccattgatgaccttagaatgttgtatgggaagaaggaacga
aagattcaaagaaaacagcaaagtaacaaagcctttcgagaaaaattgagtacttgtcaa
agagccctagaaaaaagacatacaaaatttcagaggaatgcaagacttctgaggcgtcaa
ctaacatggcaattcaataaccatttggggaagaaagggatcagtggaaaaatcaaaatt
agttatgaggaaagaactctctctgttgaggtaaagttgcctcaagatgcatcaagcggc
aatgttcgtgacactagagggctttcaggtggggaacgctcgttttcaacattatgtttt
gcattggccctgcatgacatgactgaagctccattccgggcaatggatgagtttgatgtg
tttatggatgctgtaagtcggaaaatcagcttagacactcttgtggattttgcattggct
caaggatcccaatggatatttatcactcctcatgatatcagcatggtaaaacaaggggag
aggataaagaagcagcaaatggcggctcctcgttcttga

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