Ziziphus jujuba (Chinese jujube): 107414436
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Entry
107414436 CDS
T04794
Name
(RefSeq) WD repeat-containing protein RUP2
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju04120
Ubiquitin mediated proteolysis
zju04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107414436
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
107414436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zju04121
]
107414436
Enzymes [BR:
zju01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107414436
Ubiquitin system [BR:
zju04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107414436
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107414436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_TEP1_C
YNR034W-A-like
Beta-prop_WDR75_1st
WD40_like
MVD-like_N
Motif
Other DBs
NCBI-GeneID:
107414436
NCBI-ProteinID:
XP_015878032
UniProt:
A0A6P3ZRI5
LinkDB
All DBs
Position
8:25491075..25492349
Genome browser
AA seq
424 aa
AA seq
DB search
MGAFHWPKTTKSSNNSIYEWEMKNLLTKFHLPDAQEDQNPETKGKEKENTNDEDKQLELV
EEKLKEQQQEHERARSEWDFKLSAVVSTSSSAFAAAAISDALGVIEFDQSEKLIATGGIA
RKIRIYRLQSLLSNNEGGDDVARLEHANACDYYMTTPAKLSSLRWRPGSDGRILGSGDYD
GVVMEYDLERRVPVFERDEHGGRRVWSVDYSHWGPVVAASGSDDGTMQMWDPRCDGGKSM
AAVQPSGARSSVCCVEFNPFGGPLVAVGCADRKAYGYDVRRLVDPVLVLDGHDKTVSYVR
FFDGSKIVSAGTDGCLKLWNTDDSSVIRTYKGHTNRRSFVGLSVWRNGGLLGCGSENNQV
FVYDTRWGQPIWVHEFGTVARACCDGGFVSCLCWRQVEVDQCTLVAGGSNGVLQVFVGRR
KSFQ
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgggagcctttcattggcccaaaaccacaaaatcttccaacaacagcatctatgaatgg
gaaatgaaaaatctccttacgaaatttcatcttccagatgcccaagaagaccaaaaccca
gaaacgaaaggaaaagaaaaagaaaataccaatgatgaagataaacaacttgaattagta
gaggaaaaacttaaagaacaacaacaagaacatgaaagagctaggagcgaatgggatttc
aagctctccgccgtcgtttccacaagttcctccgccttcgccgccgcagccatatcggat
gctctcggcgtcatcgaattcgaccagtcggagaaactcatagcaacgggaggaatcgcg
aggaaaataaggatttacagattgcagtccttgttatcgaataatgaaggaggtgatgac
gtggctcgtcttgagcatgccaatgcatgcgactactacatgaccactccggccaagctt
agcagcctcagatggagacccggatccgacgggcggatcttggggtccggagattacgac
ggggtcgtgatggagtacgatctcgaaaggcgggttccggttttcgagcgcgacgagcac
ggtggtcgtcgggtttggagcgtggactactcgcattggggtccggttgtggcggcttcc
gggtcggacgatgggaccatgcaaatgtgggacccacgctgtgacggtgggaaatctatg
gcggcggtgcagcctagtggagctcgaagttccgtttgttgcgtggagttcaacccattc
ggtggccctttggtagccgtaggatgcgcggatcgaaaagcctacggctacgacgtaagg
aggttagtggacccggttttagtcctagacgggcatgacaaaacggtgtcgtacgtgagg
ttcttcgacgggagtaaaatagtgtcagccggaaccgacgggtgcttaaagctttggaat
acggacgattcgagcgtgattcgcacgtacaaagggcacacgaaccgtcggagcttcgtc
ggactatccgtttggaggaatggcgggttgttgggttgcgggtcggaaaacaaccaggtg
ttcgtgtatgatacaaggtggggtcagcccatttgggtgcatgaattcggaacagtggcc
cgagcctgttgcgatggtgggttcgtgagctgcttgtgttggaggcaagttgaagtggac
cagtgtacactagtggcaggtggatcgaatggggttttgcaggtttttgtgggcagaaga
aaatcatttcaataa
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