Ziziphus jujuba (Chinese jujube): 107414605
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Entry
107414605 CDS
T04794
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju04120
Ubiquitin mediated proteolysis
zju04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107414605
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
107414605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zju04121
]
107414605
Enzymes [BR:
zju01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107414605
Ubiquitin system [BR:
zju04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107414605
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107414605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_DCAF4
EIF3I
zf-C3HC4_2
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
zf-C3HC4
Beta-prop_HPS5
Beta-prop_EML
WD40_RFWD3
Beta-prop_WDR19_1st
zf-C3HC4_3
Beta-prop_CAF1B_HIR1
zf-RING_2
WD40_like
Beta-prop_WDR35_TULP_N
zf-RING_UBOX
zf-C3HC4_4
U-box
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
zf-RING_5
zf-Nse
Beta-prop_DCAF12
zf-rbx1
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
107414605
NCBI-ProteinID:
XP_015878239
UniProt:
A0A6P3ZS24
LinkDB
All DBs
Position
1:complement(join(8448720..8448890,8449065..8449175,8449491..8449670,8449964..8450068,8450620..8450718,8450866..8451021,8451426..8451504,8452259..8452324,8452437..8452594,8452961..8453320,8453911..8454066,8454335..8454421,8454875..8455420))
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AA seq
757 aa
AA seq
DB search
MTKTVTNPPSTSHRHSAVLFFHHFFFFFFIRTPKLKSLTTKPHLLLLLLLCHSFIGSSNA
LIRTQKKKKQKKKKMGEIPSTGALVPAVKPEPSPESAAVEPSLPPEPQFQTTVDEDVIME
DADKDMLCPICMQIIKDAFLTACGHSFCYMCIVTHLHNKSNCPCCSHYLTVSHMFPNFLL
DKILQFLKKNSSSQMANTASPFQNLRQALEQGHDMSIKELDGLLSLLSEKKRKMEQEEAE
TNMQLILSFLHCLKRQKLEELNEIQSDLQYIKEDINSVERHKIELYRGKERFLVRTRILV
NDPLATNSWPSSIDEHGSAIINGAHSVPVVQMGSGNSQSQKPDVMPQTKFQGLQRKDAYS
GLDLQSVTPSAMVVARKRQIYSQFNELQKCYLRKRRYWNRQSHKWEERDRNTVSREGYNL
GLEDFQSVLSTFTRYSRLRVLAELRHGDLFQSPNIVSSIEFDRDDELFATAGVSRRIKVF
EFSSVVNEPEDVHCPIVEMPTRSKLSCLSWNKNMKNHIASSDYEGIVTVWDITTCQSVME
YEEHEKRAWSVDFSHTEPSMLVSGSDDCKVKIWCTKQEASVLTIDMKANICSVQYNPGSS
IYVAVGSADHHTHYYDLRNISQPLHTFSGTSKAVSYVKFLSNYELASASTDSTLRLWDVK
ENLPLGTYRGHTNEKNFVGLSVNSEYIACGSETNEVYVYHKAISKPMARYKIDSSELNEN
EDGSGSYFISAVSWKRDSPTMLAANSQGTLKVLVLAA
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaaccgtaaccaacccaccgtccacttcacacagacacagcgctgttctcttt
tttcaccatttcttcttcttcttcttcattcgtacgccaaaattaaaatctctcactacc
aaacctcatttacttctccttctacttctctgtcattcctttattggttcctcgaacgcg
ctgatcaggacacaaaaaaaaaaaaaacaaaaaaaaaaaaaaatgggagagatcccatca
acaggtgctctagttcctgctgttaaacccgaaccttcgccggaatccgccgccgtcgaa
ccgtcattgccaccggaaccgcaatttcagacgacggtggatgaggatgtgatcatggag
gatgcagataaggacatgctgtgcccaatttgcatgcagatcatcaaggatgctttcctc
acggcttgtggacatagcttttgttacatgtgcattgtcactcacctccacaacaagagc
aattgtccttgttgctctcactacctcactgtctctcatatgttccctaatttcttgctc
gacaagattttgcagtttctgaagaaaaactcgtcatcgcaaatggcaaacactgcatca
ccattccagaatcttcgtcaagcattagaacagggccatgacatgtcaattaaagagctg
gatggcctgctgtctctcctttcagagaagaaaagaaaaatggagcaagaagaagctgag
acaaacatgcagctcattctcagcttcttacattgtttgaaaaggcaaaagcttgaagag
ctcaacgagatacaatctgatctgcagtatatcaaagaggacataaattctgtggagaga
cataaaatagaattatacaggggaaaagagagattcttagtgagaacaagaattcttgtt
aacgatcctcttgctacaaattcatggccttcttccattgatgagcatggcagtgccatt
attaatggtgcccattctgtgccagtagttcagatgggttctggcaattcccagagtcag
aaacctgatgtaatgcctcaaacaaagttccagggactccaaagaaaggatgcttacagt
gggttggatttgcagtctgttactccatcagcaatggttgtagcaaggaaaaggcaaatc
tattcacagttcaatgaattacagaagtgttacttacgaaagcgacgatattggaacaga
caatcacataaatgggaggaaagggatagaaatactgtaagtagggaaggttataatcta
ggtcttgaagatttccaatctgttctatctacgtttacacgttatagtcgactgagagtt
cttgctgaattgaggcatggtgatctttttcaatctcctaacattgtgtctagtatagaa
tttgatcgtgatgatgaattatttgccactgctggagtttcaaggcgcattaaggtgttt
gaattttcctcggtggttaatgaaccagaagatgtccactgtcctattgttgagatgcct
acacgatctaaactcagttgcttgagctggaataagaacatgaaaaaccatattgcaagt
agtgactatgagggaatagtaacagtttgggatataactacttgtcagagtgtgatggaa
tatgaggagcatgaaaagcgtgcttggagtgttgatttttcacatactgaaccttcaatg
cttgtatctggtagtgatgactgcaaggtgaaaatttggtgcacaaaacaagaagcaagc
gttcttaccattgatatgaaagcaaatatttgttctgtccagtataatcctggatccagc
atttatgtggcagttggttctgcagatcatcacactcactattatgatttgaggaatatc
agccaaccactgcatacgtttagtgggacttcaaaagctgtttcatatgtgaaatttctg
tctaactatgaacttgcttcagcatcgactgacagcacattgcggttgtgggacgtgaag
gaaaatttaccactgggcacatatagaggccacacaaatgagaagaactttgtgggtctg
agcgtaaacagtgaatatatagcttgtggtagtgagacaaatgaagtctacgtttatcat
aaggctatctcgaaacctatggctcgttacaaaattgattcttcagaattaaatgaaaat
gaggatggttcaggatcatatttcattagtgctgtttcttggaaacgtgacagccctaca
atgttagctgcaaacagtcaaggaacccttaaagttctagtacttgcagcatga
DBGET
integrated database retrieval system
