KEGG   Ziziphus jujuba (Chinese jujube): 107414800
Entry
107414800         CDS       T04794                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107414800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zju03041]
    107414800
Spliceosome [BR:zju03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    107414800
 Complex B
    107414800
 Complex C
   U2 SnRNP specific factors
    107414800
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd LLPH Desulfoferrod_N zf-C2H2_Trps1_1st
Other DBs
NCBI-GeneID: 107414800
NCBI-ProteinID: XP_015878487
UniProt: A0A6P3ZY40
LinkDB
Position
8:join(28205489..28205662,28206007..28206120,28206228..28206332,28206513..28206655,28206754..28206850,28207335..28207496,28208022..28208093,28208650..28208808,28208930..28209007,28210125..28210253,28210576..28210722,28210991..28211137)
AA seq 508 aa
MSSTLLEVTRAGHEEVERLERLIVKELQNDPSNNKDRLFQSHRVRHMIDTITATTERLVE
IYEDKDSARKDEIAALGGQTASGTNVFSAFYDRLKEIREYHRKHPAARVVDVTEEHEALL
KEEPQIEFSGEEAFGRYLDLHELYNQYINSKFGEPIEYSAYLDIFSQPDKIPRKLKSTRQ
YREYIENLLEYLIYLFQRTEPLQDLDRMFSKVELEFEERWANGSIEGWGDNSQENGHVSD
HTVIDLDYYSTVEELMEVGPEKLKEALGALGLKTGGTVLQRAERLFLTKHMPLEKLDKKH
FAKGSRGSERNGVGAAPEAGSNLKEIALMEAKIIKLCDSLEETIARTKDNVVKKQALTYE
EIEAEREEEETQADTESDDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGN
YSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQERQGVNKWRP
DLEEEYEDKEGNIYNKKTYTDLQRQGLI
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgtcgtcgacgctattggaagtgactcgggcgggtcacgaagaagtggagcggcttgag
cggctcatagtgaaggagctccagaacgatccatctaacaataaggaccgcttgttccag
agccaccgagtccgccacatgatcgataccatcactgccaccaccgagagacttgttgaa
atttatgaagataaggacagtgcaaggaaggatgagattgccgctcttggaggccaaact
gcttctggaacgaacgtgtttagtgcattttatgatagattgaaagagattcgtgaatat
catagaaagcatccggccgcgcgtgttgtggatgttactgaggagcatgaagcactactt
aaggaggaaccacagattgagttcagtggagaggaagcttttggaaggtatcttgacttg
catgaattgtacaatcagtatatcaattctaagtttggagagcctattgagtactctgct
taccttgatatattttcacaaccagataaaattcctcgcaaactgaagtcgacaagacaa
tacagggaatatatagagaatctgttggagtatttaatatacctttttcagcggaccgag
cccttgcaagaccttgatagaatgttctcaaaggttgaactggaatttgaagagcgatgg
gcaaatggtagtatagaaggatggggagataatagtcaagaaaatggacatgtttcagac
catacagtaattgatcttgattattatagcactgttgaagagctgatggaagtgggtcct
gaaaagttaaaggaagcattaggagcattaggactaaagacgggtggtactgtgctgcaa
cgtgcagagaggcttttccttacaaagcatatgcctcttgaaaagttggacaagaagcat
tttgctaaaggttcacgtggttcagaacggaatggggttggtgcagctccagaagcaggc
agtaatttgaaagaaattgccttaatggaggcgaagataataaaattatgtgactcattg
gaagagacaattgcacgaacaaaggacaatgttgtgaagaagcaggctttgacttacgag
gaaattgaagcagaacgtgaagaggaagagacacaagctgacactgaaagtgatgatgac
gagcagcagatttacaatcccttgaagttaccaatgggctgggatgggaagcctatacct
tactggctctataagcttcatgggcttggtcaggaattcaagtgtgagatatgcgggaac
tacagttactgggggcgtagggcttttgaacggcatttcaaggaatggcgccatcagcat
gggatgcggtgtcttggcataccaaacaccaagaacttcaatgagatcacatcaattgag
gaagcgaaagagctctggaaaaagatacaagaaagacaaggagtgaacaaatggcgccca
gatcttgaagaagaatatgaagataaagagggaaacatctacaacaagaagacctacact
gatctgcaacgtcagggactgatctaa

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