KEGG   Ziziphus jujuba (Chinese jujube): 107414842
Entry
107414842         CDS       T04794                                 
Name
(RefSeq) THO complex subunit 7A
  KO
K13176  THO complex subunit 7
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03013  Nucleocytoplasmic transport
zju03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107414842
  09122 Translation
   03013 Nucleocytoplasmic transport
    107414842
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zju03019]
    107414842
   03041 Spliceosome [BR:zju03041]
    107414842
Messenger RNA biogenesis [BR:zju03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     107414842
Spliceosome [BR:zju03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    107414842
SSDB
Motif
Pfam: THOC7 RM3_Med14 DUF8302 L1R_F9L APG6_N tRNA-synt_2b Phage_pRha
Other DBs
NCBI-GeneID: 107414842
NCBI-ProteinID: XP_015878530
UniProt: A0A6P3ZST2
LinkDB
Position
8:join(30141098..30141691,30141927..30142058)
AA seq 241 aa
MLVKGRKVSGRGEAVAANYAFGAHEDDIIIKHRLLTRTTTTRGEPPLKKLQKKFTSFFLE
ADKDDSNYADCEKLARAFLQELSTFEIPLLKSKAVVEANVREKENFNELKEEINRQISHA
QSDIEDLKKLLQASKIERQHKEECEAIRKLIAMQPPRSETQKLIVELEKEIAALDAENTA
SSRMLDLRKKQFSLLLHVVDELQNTIEEEQKNMIEEMRLAAEEQKNGMEDASGGSEAMAV
D
NT seq 726 nt   +upstreamnt  +downstreamnt
atgttggttaaagggaggaaagtatcaggccgtggtgaagcggtggctgccaactacgct
tttggagcgcatgaagatgacataatcatcaaacacaggcttctgacacgcaccaccacc
acaaggggtgagccacccttgaagaagcttcagaaaaagttcacttctttcttcctggag
gccgacaaggacgacagcaactacgccgactgcgaaaagctcgccagagctttcttgcag
gagctctctacatttgagattcctctgcttaagagcaaagcggttgttgaggccaatgtc
agagagaaggaaaacttcaacgagttgaaagaggagattaacaggcagatttcgcatgcc
cagtctgacattgaagatcttaagaaactactccaagcgagcaagattgagaggcagcac
aaggaggagtgcgaggctatcaggaaattgattgccatgcagcctcctagatctgagacg
cagaagcttatagtggaactggagaaagagattgctgctctcgatgctgaaaacaccgcc
agttctaggatgctcgaccttcgcaagaagcagttttctcttctactccatgtggtggat
gagttgcaaaataccatagaggaagagcagaaaaatatgatagaggagatgaggcttgca
gctgaagagcagaagaacggaatggaggatgcaagtgggggttcagaggctatggctgtt
gattag

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