Ziziphus jujuba (Chinese jujube): 107415045
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Entry
107415045 CDS
T04794
Name
(RefSeq) SH3 domain-containing protein C23A1.17 isoform X2
KO
K13095
splicing factor 1
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107415045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zju03041
]
107415045
Spliceosome [BR:
zju03041
]
Complex A
Other components
Complex A specific factors
107415045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
KH_1
Motif
Other DBs
NCBI-GeneID:
107415045
NCBI-ProteinID:
XP_024928227
UniProt:
A0A6P6G238
LinkDB
All DBs
Position
4:complement(join(33404332..33406047,33406198..33406332,33406520..33406573,33406836..33406913,33407380..33407462,33407555..33407594,33407722..33407847,33408188..33408490))
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AA seq
844 aa
AA seq
DB search
MSAKVEPPTTALNMSGTTISSKPSTASSGQKVSMFAAKSGFVIPKNKLSGSLVPIFRGAK
KLGGSDSFIGESNKQVQRKTKWGPDLTQDTAVRRGRAFAYQTRVDQITQQLKSSVSEAED
DTNSTYAAQTPDEESSRHQIVSEKVEQLELEKREIIGEILKLNPSYKPPPDYKPILKETR
VPIPVKEYPEYNFVGLLYGPGNDNQKRLEKETGAKIQLYGTKPETGEKLEIKSSDGNKVH
GAYEELYVHISAETFEKIDAAVSVIELLITSISGNLAAASTASNLASRDNLSVSSQVQVS
TTSDLVPSAVVQPVAGPTQMPPQGQVQYTGPWFPSGPPSTAVHLPGSIPPNSSTPVVNNT
ADLSTSPFKPLNMPSLFGPPPVPVAGFNSILQAPTPVLPRAHPSTQVPQHEYMAQTSSAP
IGPQGNPSAMASQPFSAQPKVSTPFSSTGNQMPPMGSPGINRPVMPLLSQPASAATGSST
LWSTGRPVITPASADFNNTGQMAPTMVPPHRPQPLFPQPGVSSTLLSTTITASTFPPRPS
TQLSNTPLNHPTLASGFASVPRPHMGLPPTISASVSPAPVPAPAVNSFARPTLGSASVPS
IGPSVSLSQPMQSGIPTSVSKSVPNFAPVKPPLVTAPSSGDFTFQSDRPHNPTSQTVARL
NSHSANQNALPTSPMLQAPALQAPSSRLPAPNFTAQPVNQMFLRQQVADDHMGQPQSHIN
AVSFGRNPTAMLVPPRLPTFPDTSPAARNQNLLMRPRNFIPPPQMANLPGPFLPRPGNLV
QQNYPVHTNWSVNNPSFTSGKSASSPEQQLYDPFSPTSMFVASEQQGGNATKIRKQENKS
STGI
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaaaagttgaaccaccaacaacagcattaaatatgtctggaacaactatttcg
tctaagccatcaacagctagtagtggccaaaaggtttctatgtttgctgccaagtctggg
tttgttatacccaaaaataagttgtctggttcgttggttcccatcttccgaggagctaaa
aaactgggaggcagtgattcttttattggagagagtaacaaacaggttcagaggaaaaca
aaatggggtcctgatctgactcaggatactgctgttagaaggggaagagccttcgcttat
cagactcgggtggatcaaatcactcaacagctgaaatctagcgtatcagaggctgaggat
gataccaactcaacatatgcagctcaaactccagacgaggaatcatccagacatcaaatt
gtcagtgagaaggtggagcagttggaacttgaaaagcgggaaatcataggtgaaatacta
aaactaaatccaagttacaagcccccacccgattataaaccgatattgaaagaaaccagg
gttcctattccagtcaaagaatatcctgagtacaattttgttggcctactatatgggcct
ggaaatgataatcaaaagcgattagaaaaggaaactggcgccaagattcaattatatggt
acaaaaccagagaccggggagaagttagaaataaagtcatctgatgggaataaagttcat
ggtgcttatgaggagttatacgttcatatatcagcagagacatttgagaaaatagatgct
gcagtttctgtgattgaactgctaatcacctcaatatcaggaaatctggctgctgcctct
acggcttctaatttagcttctagggataatttaagtgtttctagtcaggtccaggtttca
accacttcagatttggttcccagtgctgtggtgcagccagtggcaggacctacacaaatg
ccaccccaagggcaggtccaatacaccggtccatggttcccttctggcccacctagcact
gcagtgcatttacctggctcaatccctccaaattcttctactccagttgtcaataatact
gctgatctgtcaacatcgcctttcaagcctttgaacatgccatcactgtttggccctcca
ccagttccagttgctggattcaactcaattctccaagccccaactccagttctccctaga
gcacacccatcaacacaagttccacaacatgaatacatggctcaaacaagttctgctcct
attggtccacaaggaaatccttctgcaatggcttcccagcctttctccgctcaacctaaa
gtttcaactccattctcatctactggaaatcaaatgccaccaatgggctcccctggtatc
aataggccagtgatgcctttattgtctcaacctgcatcggcggctactgggagctctacc
ctctggtcaactgggcgcccagtaattactccagcatctgcagatttcaataacacaggt
cagatggctccgacaatggttccacctcataggcctcaacctctatttccccaaccaggt
gtctcatccacgttgctgtcgacaacaattacagcctcaaccttcccacctagaccatcc
actcaattgtccaatacacctctgaatcatcctaccttggcttcaggttttgcttctgtt
ccacggcctcatatggggcttccacctacaatatcagcttctgtgagccctgcaccagta
cctgctcctgcagttaattcatttgcaagaccaacgctaggatcagcatcagttccttca
atagggccttctgtatctttatctcaacctatgcaatcaggaattccaacttctgtttcc
aaaagtgtaccaaatttcgcgcccgtaaaaccaccattggtaacagctccaagttctggt
gattttacttttcaatctgatcgaccacataatccaacctctcaaactgttgccaggctg
aacagtcactctgccaatcagaatgctcttcctactagtccaatgctgcaagctccagca
cttcaggcgccatcttcccggttgcctgcacctaatttcactgctcaacctgtcaatcaa
atgtttttgaggcagcaggttgcagacgaccacatgggtcaacctcaatctcatataaat
gctgtttcctttggccgaaacccaactgcaatgttagtacctcctagacttcctacattt
ccagacacaagtcctgcagctagaaatcagaacctgcttatgcgacctaggaactttatt
ccacctccccaaatggccaatttgcctggtcctttccttcctagaccaggaaatcttgtc
caacaaaattatcctgttcatacaaactggtcagtcaacaatccctcatttaccagtggc
aagtcagcttctagtcctgaacagcaactttacgatccgttctcgccaacttccatgttt
gtcgcatctgaacaacagggaggtaatgcaacgaagatcagaaaacaggagaacaaatca
agtactgggatctga
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