KEGG   Ziziphus jujuba (Chinese jujube): 107415081
Entry
107415081         CDS       T04794                                 
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107415081
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zju03019]
    107415081
   03110 Chaperones and folding catalysts [BR:zju03110]
    107415081
   03029 Mitochondrial biogenesis [BR:zju03029]
    107415081
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zju04147]
    107415081
Enzymes [BR:zju01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     107415081
Messenger RNA biogenesis [BR:zju03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     107415081
Chaperones and folding catalysts [BR:zju03110]
 Heat shock proteins
  HSP60 / Chaperonin
   107415081
Mitochondrial biogenesis [BR:zju03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    107415081
Exosome [BR:zju04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107415081
  Exosomal proteins of other body fluids (saliva and urine)
   107415081
  Exosomal proteins of breast cancer cells
   107415081
  Exosomal proteins of colorectal cancer cells
   107415081
  Exosomal proteins of bladder cancer cells
   107415081
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 107415081
NCBI-ProteinID: XP_015878843
UniProt: A0A6P3ZTT4
LinkDB
Position
4:complement(join(33718530..33718543,33718647..33718770,33718860..33718952,33719037..33719129,33719324..33719428,33719543..33719614,33719710..33719787,33719871..33720040,33720128..33720362,33720449..33720691,33720778..33720873,33720961..33721098,33721207..33721332,33721495..33721719))
AA seq 603 aa
MASTFAAGSLAPPTSARLVDTKFRKLSSSSSIASTPSFAARRNLLLRRTPSPWRISAMAK
DLHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVEL
EDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEK
TTKALVSELKTMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSA
DNSLYVVEGMQFDRGYISPYFVTDSEKMAVEYDNCKLLLVDKKITNARDLINVLEDAIRG
GYPIVVIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRD
EVGLTLDKAEKEVLGHASKIVLTKDSTTIVGDGSTQEAVNKRVAQIRNLIEAAEQDYEKE
KLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLA
SKVDTIKDGLDNDEEKVGADIVRRALSYPLKLIAKNAGVNGSVVSEKVLSSDNVKYGYNA
ATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPAPVGNPMDNSG
YGY
NT seq 1812 nt   +upstreamnt  +downstreamnt
atggcatcgactttcgcagctggttccttggctcctcctacaagcgctcgtctcgttgat
accaaattccgaaagctttcgtcttcgtcatctattgcatcaaccccttcctttgctgcg
aggcgtaaccttttgcttagaagaacaccttctccatggagaatctctgccatggccaag
gacttgcatttcaacaaggatggttccgccattaagaagctccagactggtgttaacaag
ctcgctgatttagttggggttacactgggtccaaaaggcaggaatgttgtgctagagagc
aagtatggctctcccaaaattgtcaacgacggtgtcactgtcgccaaggaggttgaattg
gaggaccctgtggagaacattggagctaaattggttagacaggcagctgcaaagactaat
gatttggctggtgacggaactacaacatcagttgttcttgctcagggtcttattgctgaa
ggtgtcaaggttgtagcagctggggctaaccctgttttaattacacgagggattgagaag
accacaaaagctcttgtttccgaacttaagaccatgtctaaggaggtcgaagacagtgaa
ttggcggatgttgcagctgttagtgcaggaaacaactatgaggttggtaatatgatagct
gaagccatgagcaaagtgggccggaagggcgtggtgacccttgaagagggaaagagtgcc
gacaacagtctgtatgttgttgagggaatgcaattcgatcgtggttatatctcgccttat
tttgtaactgacagtgagaaaatggcagtggagtacgacaactgcaagttgctattggta
gataagaaaataaccaatgcaagagaccttatcaatgtgctggaggatgctatcaggggt
gggtacccaattgtggttattgcagaagacattgagcaagaagctttagcaactctggtt
gtgaacaaacttagaggtgctttaaagattgctgctctcaaagctcctggttttggtgaa
cgcaagagccagtaccttgatgacattgctattctcactggaggaactgtgatcagagat
gaggtggggctcaccttagataaagcagaaaaggaggttcttggccatgcctcaaagatt
gttcttaccaaggattccaccacaattgttggcgatggaagcacgcaggaagcagttaac
aagcgagttgcacagatcagaaaccttatcgaggctgcagagcaagattatgaaaaggag
aaactcaatgaaagaattgcaaagttatctggtggtgttgctgtgatacaggttggagca
caaactgagacggagctaaaagaaaagaaactgagagttgaagatgctcttaatgccaca
aaggctgctgttgaggaagggattgtagttggtggtggatgcaccctgctgagacttgca
tcgaaggtggataccatcaaggatggccttgataacgatgaagagaaggtgggagcggat
attgttagaagagctttaagttatccactgaaattaattgcgaagaatgctggtgttaat
ggaagcgtagttagtgagaaggtgctctccagtgacaatgttaagtatggatataatgct
gccactggaaaatatgaagatttaatggctgctggaattattgatccaacaaaggtagtg
agatgttgcctcgagcatgctgcttcggtagcaaaaacgttcttaatgtcggattgtgtg
gttgtggagattaaggagccagagcctgcccctgtgggtaaccccatggacaattcagga
tatggatattga

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