Ziziphus jujuba (Chinese jujube): 107415107
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Entry
107415107 CDS
T04794
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107415107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zju04121
]
107415107
Enzymes [BR:
zju01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107415107
Ubiquitin system [BR:
zju04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
107415107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_UBOX
zf-RING_6
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
107415107
NCBI-ProteinID:
XP_015878878
UniProt:
A0A6P3ZJC7
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All DBs
Position
4:join(33274923..33275141,33275320..33275706,33275789..33276109)
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AA seq
308 aa
AA seq
DB search
MSPRGSFCREVIEAHISCGDSDVATSNAEARSSPFKKAASSLNGNLGMASTNDVHELLEC
PVCMNLMYPPIYQCANGHTLCSSCKGRVYNSCPTCRLELGNIRCLALEKIAESLELPCRY
QILGCNEIFPYYSKLKHEKSCKCRPYNCPYAGAECPVTGDISFLVMHLQNDHKVDMHDGS
TFNHRYVKSNPEEFENATWTLTVFNCFGRQFCLHFEAFQIGKAPVYMAFLRFMGDDQEAK
QFSYSLEVGGNGRRLMWQGTPRSIRDSHRKVRDSQDGLIIQRNLALFFSGGNRQELKLKV
AGRIWKEQ
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtctccacgaggtagcttttgcagagaagtgattgaggctcacatttcatgtggagat
tctgatgtagcaacttcaaatgctgaagcaagaagttctcctttcaaaaaagctgcctct
agtttgaatggaaaccttggaatggcatcaaccaatgatgtccacgagctgcttgagtgt
cctgtttgcatgaatttgatgtaccctccaatttatcagtgtgcaaatggacatactcta
tgttcaagctgcaagggtagagtatacaattcctgccccacttgtcgcctcgaactcggg
aacataaggtgtttggcactggagaaaatagcagaatcactggaactcccttgtagatac
caaattttgggttgtaatgaaatatttccatactacagcaagctcaagcatgagaaaagc
tgtaaatgtcgtccgtacaactgtccttacgctggagctgaatgtccagttactggtgac
atctcattccttgtgatgcatctgcagaatgatcacaaggttgacatgcatgatggctct
actttcaaccacagatatgttaaatccaatcccgaggaattcgaaaatgctacatggaca
ctaacggttttcaactgttttggcaggcagttctgcttgcatttcgaggcattccagatt
ggaaaggcacctgtttacatggccttccttcggttcatgggagacgatcaagaagcaaag
caattcagttatagtcttgaagttggtggcaatggcagaagactaatgtggcaaggaact
ccaaggagtatccgcgatagccatagaaaagttcgagacagtcaagatggactaatcatt
cagaggaacttggcacttttcttctcaggtggtaacaggcaggagctgaagctgaaagtg
gcaggtcgaatatggaaggaacagtag
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