KEGG   Ziziphus jujuba (Chinese jujube): 107415198
Entry
107415198         CDS       T04794                                 
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
  KO
K03002  DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107415198
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zju03021]
    107415198
Enzymes [BR:zju01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     107415198
Transcription machinery [BR:zju03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     107415198
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpa2_4 RNA_pol_Rpb2_2
Other DBs
NCBI-GeneID: 107415198
NCBI-ProteinID: XP_015878970
UniProt: A0A6P3ZZI5
LinkDB
Position
4:join(32824707..32824872,32825063..32825136,32825257..32825376,32825638..32825714,32826079..32826142,32826463..32826533,32827163..32827240,32827339..32827384,32828301..32828481,32828559..32828611,32828728..32828801,32828945..32829062,32829671..32829758,32829973..32830088,32830805..32830932,32831029..32831108,32831810..32832051,32832161..32832325,32832453..32832617,32832726..32832800,32832931..32833034,32833127..32833202,32833942..32834070,32834199..32834339,32834445..32834657,32835119..32835415,32835688..32836092)
AA seq 1181 aa
MTMKSVPEKENEDLRELFRHHIESFDHMVSEGLETMLLRVKPVKVYDSSTGKTLNISLEN
PEVHQPLKESRVGDLLLPFECRQAKISYSGKFTADVCFQYDKGAVIREKISLGSLPIMLK
SKFCNLRGASPQKLVFYREESSEMGGYFILNGLERVVRLVIAPKRNYPMSLVRGTYLNLR
EGYTDKAVSIRCVREDQSSVTVRLYYLNNGSARLGFWIKGREYLLPVGIVLKALIDTTDR
EIYASLTCCYSDKYEKGKGAVGTQLVGERAQIILDEARYLSLFTQRQCLEHIGEHFQSIM
DGLENESYSSVADAVFKDYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDSLQNQ
EVLLPGHLITIYLKEKVEDWLNKFKSLIQDQINDKSKNFDLCSLADVKKVMDKNPARNIG
LAVENMLKTGRIVTRSGLDLQQRAGFTVQAERLNYLRFLSHFRAVHRGASAAALRTTSVR
KLLPESWGFLCPVHTPDGDPCGLLNHMTCTCRITSYLDSQGNTKDFFDIRKSILSVLIEV
GMSPSLPKLVHAGLPEMLSVLLDGRVVGYLSSSEIEKVVAHLRRLKVSSAPGIPDDLEVG
YVPLSMGGAYPGLYLSTSPARLVRPVRNISIPSMDGQDIELIGPFEQVFMEIRCPDGGDG
GRRQSFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIHFRAD
QKLYHLQTPQSPIVRTSAYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVDRGM
FHGQIYQTETIDLSDGSKRSDRSEGMFRRSTLDKSVHSSIDSDGLPYVGQMIKPDEPYCS
IYNKVTSKIRTVTRKGSEPGIVDYVAVDVKNKTDIQKVNIRFRQPRNPVIGDKFSSRHGQ
KGVCSQLWPDIDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKYVDAT
PFASSAKKANGETVPEPSSVDKANGETESNPNSLVDELGKMLRQKGFNYHGVEVLYSGVY
GTELKCEIFMGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGVRFGEMERDS
MLAHGAAYLLHDRLHTCSDRHIADVCTLCGNILTTSLVRPQKPRDVGGLPPRGSKKVTCH
FCQSSKGMETVAMPYVFRYLAAELAAMNIKMTLKVSNGAGA
NT seq 3546 nt   +upstreamnt  +downstreamnt
atgacgatgaaatcggtgccggagaaggaaaacgaggaccttcgggaactgttcaggcac
cacatagaatccttcgatcatatggtaagtgagggattggaaaccatgcttctccgcgtc
aagcccgtcaaggtctacgactcttccaccggcaagacgcttaatatatcgctggagaat
cctgaggtgcaccaaccactaaaggaatcgagagtgggcgaccttctgcttcctttcgaa
tgtaggcaggctaaaatttcatattccggcaagttcacagcggatgtttgctttcagtat
gataagggggctgtcataagagagaagatcagtcttggatccttgcctataatgctaaag
tcaaaattttgcaacttgagaggtgctagtccccaaaaattggttttctatagggaagag
tcatcagagatgggtggatacttcattttgaatggacttgagagagttgttcgccttgta
atagctccaaagcggaactatccaatgagtcttgttcggggtacatatcttaatctgcgc
gaaggatatactgataaagcggtttccataaggtgtgtacgagaagatcaatcttcagta
acagttagactgtattaccttaataatggaagtgcaagacttggcttttggataaaggga
agggagtacttgctacctgttggcattgttttaaaggcccttatcgacactaccgatcgt
gaaatttatgcaagtttgacatgctgctatagtgataagtacgagaagggaaaaggtgct
gttggcactcaacttgttggtgaaagggcgcaaattattctagatgaagctcgatatttg
tcccttttcactcagcgtcaatgtctagagcacattggggagcacttccaatctattatg
gatgggctggaaaatgaaagttattcttctgttgcagatgctgtttttaaggactacata
tttgttcaccttgataacaattatgacaagttcaatctgctcatctttatggtgcagaaa
ctattttcacttatagatcagacttccgtgccagacaatccagattccttgcaaaatcag
gaagttctactccctggtcacttgattaccatttatctaaaggaaaaagtggaagattgg
ctgaacaagttcaaaagccttattcaagatcagatcaatgacaaaagcaaaaactttgat
ctttgcagcttagctgatgtaaagaaggttatggataaaaatcctgcaaggaatatcggt
ttagctgttgaaaatatgttgaaaactggaagaattgttactcgatctggtcttgatctc
cagcagagagcaggctttacagttcaagcggagaggcttaattatttgcgttttctttct
cattttcgtgctgttcatcgaggcgcttcagctgctgcacttcgaaccacaagtgtgcgg
aagctgctacctgaatcttggggatttctttgtcctgtgcacacacctgatggggatcca
tgtggcttgctaaaccatatgacttgcacctgccgaattacttcttatttggattcacaa
ggaaatactaaagatttctttgacatacgaaagtctatcctcagtgttcttattgaggtt
ggaatgtcaccttcactgccaaagttagttcatgctggtcttcctgaaatgctttctgtt
cttttagatggtcgtgttgtcggttatctatcttcctctgaaattgagaaagttgtggct
catttacgaagattgaaagtttcgtctgctcctgggattccggatgatctggaagtagga
tatgttccattgagcatgggaggagcatatcctggtttatacctgtccacatcacctgct
agacttgttcgtccagtaagaaatatttcaatcccttctatggatggccaagatattgaa
cttattgggccatttgagcaggttttcatggaaataagatgtccggatggtggggacggt
ggaagaaggcaatcttttcccgcaactcatgaagaaatacatccaactggaatgctcagc
gtggttgctaatcttacaccttggtcagatcacaatcagagcccacgtaatatgtaccag
tgtcagatggcaaaacaaacaatggctttctcttcacaagcaattcacttccgagccgat
caaaaactgtaccatcttcagactcctcaatctccaattgtacgcacaagtgcatataca
aagtacaacatagatgaatatccaactggcacaaatgcaattgttgctgtattggcatat
accgggtatgatatggaagatgccatgattttgaacaagtcatctgtggatcgtggaatg
tttcatggtcaaatatatcagacagaaacaattgacttgtctgatggaagcaaaaggtct
gacaggagtgaagggatgtttagaagaagtactttggataaatcagtgcattcttcgatt
gattcagatgggcttccctatgttggccagatgataaagccagatgaaccctattgtagc
atctacaacaaggtaacaagtaagataagaactgtcacacgaaagggttcagaacctggt
attgttgactatgttgctgttgatgtaaaaaacaaaactgatattcagaaggttaatata
cgctttcgacaacctagaaatcctgttattggtgataaatttagcagccgacatgggcag
aaaggtgtttgctcccagttgtggcctgatatcgatatgccattttctggagctacgggc
atgcgtccagatcttattataaatccacatgcatttccttcgaggatgacaatagccatg
cttttggaatcaattgctgcaaagggtggcagcttacatggaaaatatgttgacgccaca
ccatttgccagttcagctaagaaagctaatggagaaaccgtaccagaaccttcttcggtc
gacaaagccaatggagagacagaatcaaatcccaattcacttgttgatgaattgggtaaa
atgttaagacagaagggattcaattaccacggtgtagaggtgttgtacagtggggtttat
ggaacagaactcaaatgtgagatctttatggggcccgtctattatcaacgactacgacac
atggtttcagacaaatttcaggttcgatccacaggaacagtagaccaggtcactagacaa
cccatcaaagggagaaaacgtggtggtggtgttcgatttggtgaaatggagcgggactcc
atgcttgcacatggggcagcatatttgctgcatgataggcttcatacatgttctgatcgt
catattgctgatgtttgtactctttgcggaaacatcctcaccacatcgttagtccggcca
caaaagccgcgtgacgttggtggcctaccccctagaggttctaagaaggtcacctgccat
ttttgccagtcaagtaaaggaatggagacagttgcaatgccatatgtctttagatatttg
gctgcagaactagcagccatgaacataaaaatgaccctcaaagtgagtaacggagcggga
gcctaa

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