KEGG   Ziziphus jujuba (Chinese jujube): 107415448
Entry
107415448         CDS       T04794                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    107415448
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zju03400]
    107415448
DNA repair and recombination proteins [BR:zju03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     107415448
SSDB
Motif
Pfam: XPG_N XPG_I UBM XPG_I_2
Other DBs
NCBI-GeneID: 107415448
NCBI-ProteinID: XP_015879261
UniProt: A0A6P3ZUU9
LinkDB
Position
4:complement(join(31096809..31097369,31097672..31098202,31098396..31098480,31098679..31098815,31098912..31099206,31099549..31099634,31099981..31100175,31100552..31102292,31102418..31102602,31102838..31102891,31102986..31103063,31103191..31103317,31103398..31103495,31103569..31103646,31104011..31104125,31104213..31104385,31105036..31105286,31105434..31105521))
AA seq 1625 aa
MGVQGLWELLAPVGRRVSVETLAGKKLAIDASIWMVQFMKAMRDEKGEMVRNAHLLGFFR
RICKLLYLRTKPVFVFDGGTPALKRRTVIARRRQRENAQAKVRKTAEKLLLNHLKAMKLK
ELAEDIKNQRQKMNDAKGKKVLGEQTNMVEDNSGKNDVASRECNQEKLDEMLAASIAAEE
DGTLTNNATMSTAGNFCEDHDEEDEEMILSDLHGEIDPAVLAALNPSMQLDILRQKQKQD
NDVKGKKVVSDQDDVVSWNSTQDKIDEMLAASIMAEEDRNLRMPSTSAAAHVEEVGDIEE
DEDGDEEMILETMHGDVDPAVLASLPPSMQLDLLVQMRERLMAENRQKYQKVKKDPTQFS
ELQIQAYLKTVAFRREIDQAQKAASGRGVGGVQTSRIASEANREFIFSSSFSGDKEALTA
GRAETSGDKQQPSSEHLSTLLNTITSTSNLNTVTGSNSDESSRVFDDNIETYFDERGRVR
ISRLRAMGFRMTRDLQRNLDLMKEVEQEKTSANKMESVINGSNSAVQITSSCKHNLVTIS
PNGAAESVKVNEKNEDFTLKSGTSIEISFEDDGDSRGLDGDDDIFASLVAGNPIKVCSDD
NAPSRVLQSTSDSDCEWEEGTIGETGNNFSNDVNLNIEPLSGEGNISDDGGVEWEEGICE
VNKSTLCCPAESRPEISKGLLEEEADLQEAIKRSLEDLGDKKSNYALGEDEKLNISAGKA
YEDNEFLDQENEKDEPTSPGKIDTRLSKSTFKIVDGVKKMDDLGGISISQTIDSSGKLLK
SSVPYIPNVERILIGTPHEGYLGPSEPIGYASEKTSLCEETPHAETVAPLKTKEFKVVAE
HVDACNKGSGLSTFSNMNAKNNSHTSDISTGEITDAAQVIDQKTGCEAETSHHLVEISNP
AVPLVGTLTDELILDIDTEQKLDAQKSDESFSQGSDHNLEKSPIRGNENVQFEDLEDNLE
EEMHILSEERMNLGDEQRRLERNAESVSSEMFTECQELLQMFGLPYIIAPMEAEAQCAYM
EIANLVDGVVTDDSDVFLFGAQSVYKNIFDDRKYVETYFMKDIEKELGLTRKQLVRMALL
LGSDYTEGVSGIGIVNAIEVVNAFPEEDGLQQFRDWIESPDPTILGKFEVHTGPTAKRNE
LKVSDNENFSKSNTEELPASHENNSQAQEQNQAADYIREKKQIFMDKHRKVSKNWHIPPS
FPSEAVVNAYACPQVDKSTEPFIWGKPDHFVLRKLCWEKFGWGNQKADELLIPVLKEYNK
HETQLRLEAFYTFNERFAKIRSKRIKKAVKGITGDQSSELMGEAAQDISRSRKKRSRPKE
TGNDQKEKLSEGTEESVFTYQSNLGNRTTPKQSRKRKVPGEGVLSEPQIISKGKQRTDKR
SHANKRGRGRGRGRVMGRGKGKGSLSFEASETSSSATDCDDDDDAREVHMETSEQEVRKS
TRARKPVDYKDIDDQDGLNEEVGEEELSVAGHRDDGSSLAENEEHNSGNPCIGEESCRDY
LETGGGFCPDEGENRQPDVSQHDAPPSSEAGLPEDYLKTGGGFCMDEDGIAVGQDEACAA
EATVSESADLSHCSDPGSVDAHVSELSRDHMNATINDDQSKLGAETTPVVSLSAMPLLKR
KRRKS
NT seq 4878 nt   +upstreamnt  +downstreamnt
atgggagtacagggtctatgggaactactggcacccgtgggtcgccgcgtctccgtcgaa
accctagccggaaagaagctggccatcgatgccagcatatggatggtgcagttcatgaag
gccatgagggacgaaaagggagagatggttcgcaacgctcatttgctcggctttttccgc
cggatttgcaaactactgtatctgcggaccaaacccgtcttcgttttcgatggcggaaca
cctgctctcaagcgccggaccgtgattgctcgccggagacagcgtgagaatgcccaggcc
aaggtccgaaagactgctgagaaattgcttctcaatcatcttaaggcaatgaagctgaaa
gaactagctgaggatatcaaaaaccagaggcagaaaatgaacgacgctaagggtaagaag
gtattgggagaacagaccaatatggtggaggataattcaggaaaaaatgatgtggcctcc
agggaatgtaatcaggaaaagctagatgaaatgttggcagcatctattgcagcagaggaa
gatgggactttaactaataatgcaacaatgtctactgctggcaatttttgtgaggatcat
gatgaggaagatgaggagatgatactgtcagatctgcatggtgaaattgatcctgctgta
ttagctgctttaaatccatcaatgcaacttgatattcttagacagaaacagaagcaggat
aatgatgttaagggtaagaaggtcgtgtcagatcaagacgatgtggtctcatggaatagc
actcaggacaaaatagatgaaatgttagcagcatctatcatggcagaagaagataggaat
ctaaggatgccatcaacatctgctgccgctcatgttgaggaggttggtgacatagaagag
gatgaagatggagatgaagagatgatactggaaacaatgcatggtgacgttgatcctgct
gtattagcttctttgcctccatcaatgcaacttgatcttcttgttcaaatgagagagaga
ttgatggcagaaaacagacaaaagtaccaaaaagtcaagaaggaccctacacaattctct
gagctacaaatacaggcttatctcaaaactgttgctttccgtcgggagatagatcaagca
cagaaggctgcttctggaagaggagtaggtggtgtacagacttcacgaatagcatctgaa
gccaacagggaatttatcttctcgtcatcatttagtggcgacaaagaagcactgacagct
ggcagagctgagacatctggagataagcaacaaccatcttctgaacatctttcaacttta
ttgaataccattacatctaccagtaacttgaacactgtgactggatcaaactctgatgaa
tcaagtagggtttttgatgacaatattgaaacatattttgatgagagggggcgggttcgt
atcagcagactgagagcaatgggtttccggatgacccgtgatttacagaggaacttggat
ttgatgaaagaggttgagcaagagaaaacaagtgcaaacaagatggagtctgtgataaat
ggaagtaatagtgctgtccaaataacttcatcttgtaaacacaatttagtaacaatttca
ccaaatggtgctgctgaatctgttaaagtgaatgagaaaaatgaggattttacattgaaa
agtggaacttctatagagatttcttttgaagacgatggtgatagcaggggtttggatggt
gatgatgacatctttgctagtttagtggccggaaatcctataaaagtttgttctgatgat
aatgctccatcaagagtactgcaatctacttctgattcagactgtgaatgggaggaaggt
acaattggagaaacaggcaataatttttctaatgatgttaacttgaatattgagcccctt
tctggtgaaggcaacattagtgatgatggtggagtggaatgggaggaaggaatttgtgaa
gttaataaaagcactttatgttgcccagctgagtcacgaccagaaatttccaaaggtctt
ttggaagaagaggctgatttgcaggaggctataaagagaagcctagaggatttaggagac
aagaagtctaattatgcattgggtgaagatgagaaattaaatatttctgcaggaaaggct
tatgaagataatgagtttcttgatcaagaaaatgagaaagacgagccaacttcaccggga
aagattgatacacgactaagtaaatcaacttttaaaattgttgatggagttaaaaagatg
gatgatctgggtggaatcagtatctcacaaaccatcgattcttctgggaagctgttgaag
tcatctgtaccatatattcccaatgttgagaggatactgattggcacaccacatgaagga
tacttgggtccttcagaacccattggatatgcaagtgaaaaaaccagtttgtgtgaagaa
acaccccatgcagaaactgttgcacctttgaaaacaaaggagttcaaagtggttgcagaa
catgtggatgcctgcaacaagggaagtggcttgtctaccttctctaatatgaatgcaaaa
aataattcccatacttctgatatatcaactggtgaaattactgatgccgctcaggtgatt
gatcagaaaactggttgtgaagctgaaacatcccatcatttagttgaaatatctaatcca
gctgttcctttggtgggaacactgacagatgaattgatattggatattgacacggaacaa
aaattggatgcacagaaaagtgatgaaagtttttcccagggaagtgaccacaacttggaa
aagtctccaattaggggcaatgagaatgtgcagtttgaagacctggaggataatttggag
gaggaaatgcatattttgagtgaagaacgtatgaacttgggagatgagcaaagaaggctt
gaacgcaatgctgaatctgttagtagcgagatgttcacagaatgtcaggagcttctgcaa
atgtttggcttaccatatataattgctccgatggaagctgaagctcagtgtgcttatatg
gaaattgcaaaccttgttgatggtgttgtgacagatgactcggatgtgttcttatttgga
gcgcagagtgtttacaagaacatatttgatgatcgcaaatatgtggaaacatacttcatg
aaggacattgagaaagagcttggcctgaccagaaaacaattagttcgcatggcacttctt
cttggaagtgattatactgaaggggttagtgggatcggcattgttaatgctattgaggta
gtaaatgcatttcctgaggaagatggcctccaacaattccgtgactggattgaatcaccg
gatcccaccatcttagggaagtttgaagtacatactggaccaactgccaaaagaaatgaa
ttgaaagttagtgataatgagaatttctcaaaaagcaacacagaagaattgcctgcatct
catgagaacaattcccaagctcaagaacagaatcaggctgctgattatattcgagaaaag
aagcaaattttcatggataaacatagaaaggtgagcaagaactggcatattccgccttct
tttcccagtgaagcagttgttaatgcttatgcttgtccacaagtggacaaatcaactgaa
ccttttatatggggaaagccagaccattttgttcttcgcaaattgtgttgggaaaagttc
ggctggggcaaccagaaggcagatgaattgttgatacctgttttaaaggagtacaacaaa
catgagactcaactgcgtttggaggcattttacacatttaatgaaagatttgcaaaaatt
cgtagcaagagaattaagaaagctgtcaaaggaatcactggagaccaatcctcagagtta
atgggtgaggctgcgcaagacatttctagaagtagaaagaaaagatcaaggcctaaagaa
actgggaatgaccaaaaggaaaagctgtctgaggggacagaggaaagtgttttcacatat
cagagtaacctagggaatagaactactcccaagcagtcgaggaaaaggaaggtacctggg
gaaggggttttgtccgagccacaaattatctcaaaaggcaaacaacgcactgataaaaga
tcacatgcgaataaaagaggtagaggaagagggagaggcagggtaatgggaagaggaaag
ggaaaagggagtcttagttttgaagcatctgaaaccagctccagcgccactgactgtgat
gatgatgatgatgctcgggaagttcatatggagacgtcagaacaagaagtgcgtaagtca
accagagcacgcaagcctgtagattacaaagatattgatgatcaggatggcttaaatgaa
gaggtaggagaggaagaattgtctgtagctggacatagagatgatggttctagtcttgct
gagaatgaggagcataattctggaaatccttgtattggggaggaatcctgtagagattac
cttgaaacaggaggcgggttctgtccagatgaaggtgaaaaccgtcaacctgatgtaagc
cagcacgatgctcctccttcatccgaggcagggcttcctgaagactaccttaaaactgga
ggtggtttttgcatggacgaagatgggattgctgttggccaagatgaagcttgtgcggct
gaagctactgtctcagagagtgcagacctttctcattgctctgatccagggagtgtagat
gcacatgtttctgagctgagtagggatcatatgaacgccacaatcaatgatgatcagtcc
aaattgggtgctgagacgactcctgtcgtgtctctaagtgccatgcctcttctgaaaaga
aaacgaaggaagagctga

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