KEGG   Ziziphus jujuba (Chinese jujube): 107415493
Entry
107415493         CDS       T04794                                 
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH17 isoform X1
  KO
K15271  ATP-dependent DNA helicase HFM1/MER3 [EC:5.6.2.4]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:zju00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zju03036]
    107415493
Enzymes [BR:zju01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     107415493
Chromosome and associated proteins [BR:zju03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    107415493
SSDB
Motif
Pfam: Sec63 DEAD SNRNP200_wHTH Helicase_C ResIII HHH_5 Cdd1 AAA_22 HHH T2SSE IMS_HHH_1
Other DBs
NCBI-GeneID: 107415493
NCBI-ProteinID: XP_024928594
UniProt: A0A6P6G384
LinkDB
Position
4:complement(join(31639222..31639766,31639856..31640361,31640463..31640664,31640766..31640848,31641227..31641244,31641400..31641449,31641550..31641801,31641906..31642094,31642171..31642367,31642456..31642581,31642689..31642772,31642859..31642922,31643005..31643122,31643234..31643283,31643447..31643518,31644033..31644084,31644170..31644326,31644444..31644656,31644771..31644792,31644955..31644992,31645273..31645319,31645452..31645533,31645612..31645849,31645966..31646127,31646476..31646656,31646954..31647021))
AA seq 1271 aa
MDSYTLKSVSDLPAPFRSTFSFRYFNSLQSECFPVCFHSDVNMVVSAPTGSGKTVLFELC
ILRLLSRFISEEKFFHVKGTLKTIYIAPSKALVQEKLRHWNQKFGSWGINCLELTGDNES
YSLRNVQEADIILTTPEKFDAVTRHSLKGGGLSFFSDIALLLIDEVHLLNDPRGAALEAI
VSRIKILSQNPDMKLSSLANVRFLAVSATIPNIEDLAMKSLRSYTSIKTIAAEWLKVPVQ
GIKRFGEEMRPVKLTTKVFGYAPAKNDFLFEKRLQNYIFDILMQNSRGKSALVFCSTRKG
AQEAAQRISHVAMTFGHSNPFIKDREQQERLREASLSCSDKQMQSYIIYGVGYHNGGLCL
KDRNLIESLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQ
MCGRAGRPPFDDTGVVIIMTRRDTVHLYENLLNGCEMVESQLLSCLTEHLTAEIVQLTVS
DITRAIEWMKCSYLYVRMKKNPGNYAVKKAISSDRIEKHLQEICVQKVNELSMHQMIWTD
EDGFLLKPLEPGRLMTKYYLKFDSMKLIMQTPVNCTLEDALRIICRAGEIAWIQLRRNEK
KPLNDINNDKDGRLRFHILSDNGKRKKRIQTREEKIFVLVNDCLTGDPSVRDLSLTQDMN
SICSNGCRIAKCMKEFFIYKKNYKGALNSTLLAKSLYQKLWDDSPYLLKQLPGIGMVTAK
ALHSMEIQSFEALAEADPRRIEIITGRKYPFGNHIKDSLLSLPPKVDLKVEETECQIRGK
SKLMVTLTRMTQPLQSMKRHYADMIVGSEEDNLILFHEKIRVDEFSSPYSATIFLSNPPQ
GKLNVKADLVFEEYIGIDLHQKVVLVKERSFNLNNQMGKMQQSSFAPPQEVYVIEDDEET
TSQAPIKDVNSSIKSKRQSESAPSFNLLDEDLDEGDAEGKFTSTFMIYVSVLFHPFSLIT
CILPLIIEGELSVKVTEEENKIMTEKNIFDSIREKAKSFPEFPPSNIVQSPSTEALILTR
KRTREKQLESYSEVEVLNELGENIPKWSMAKSYVEPSEAEQNAHNTGNHPIQNNHITARN
SDASNFMDDAGGLPPDPKDFPFKSFTEETIFDHIRKKAKNFPQLRKQPEYCTDAFDVLQG
TKCSDVMGDYILISDTENGEVEKDVYGSRVSQKVKQNLYSGSSYQTFGTKNVTPRISSTG
TDQSSIKMPAFDVPVLKNSKEKSDPCSSIESRKKQRHYPSVLQKQCRSLATASKIREVES
FLGFETVFSFL
NT seq 3816 nt   +upstreamnt  +downstreamnt
atggattcatatacactgaagtccgtgtcagatttgcctgctccttttcgatcaactttt
agtttcagatatttcaattctctgcagagtgaatgctttccagtttgtttccactctgat
gtaaacatggtcgtttctgcaccaactggaagtggtaaaacagtactctttgagctttgc
atcttgaggcttctctcgcggttcatctctgaggagaagttttttcatgtgaagggaacc
ctcaagacaatctacatagccccatctaaggctttagtacaggagaagcttcgtcattgg
aaccaaaaatttggatcgtggggtataaattgcttggagctgactggagacaacgaatct
tacagcttaaggaatgtacaagaagcagacattattctaaccactcctgagaaatttgat
gcagtaactcggcatagcttaaaaggtggtggcttaagctttttcagtgatatagctctt
ctccttattgatgaagtccatctattgaatgatccacgtggagcagctttggaggcaatc
gtcagtagaattaagattctttctcaaaaccctgatatgaaattaagttccttagcaaat
gttcgttttctagctgtatctgcaacaattccaaatattgaggaccttgcaatgaaatct
ttgagaagttacacctccattaaaacaattgcagcggaatggctcaaggttcctgtccaa
gggatcaaaaggtttggagaagaaatgaggcctgtaaagttgactacaaaagtttttggc
tatgccccagcaaaaaatgattttctatttgaaaaacgcctccagaattatatatttgat
atcctaatgcaaaattcaagagggaaatctgctctggtcttttgttcaactagaaaagga
gcacaggaagcagcacagaggatctctcatgttgccatgacctttggtcattcaaatcca
ttcatcaaagacagagaacagcaggaaagactaagggaagcctcattatcatgcagtgac
aaacaaatgcaatcttacattatttacggtgttggttatcacaacggtggactttgtctc
aaggatcgcaatctcattgaaagtctttttcttaagggtgacattcaagtactgtgcaca
acaaacacacttgcccacggaatcaacctaccagcacatacagtagtaataaaatcaacg
cagcacttcaacaaagaaaaaggtctatacatggaatatgacagatccacaatactacag
atgtgtgggagggcaggtcggccaccatttgatgatacaggagtagttataatcatgaca
aggagagatacggttcatttgtatgagaatctcttgaatggatgtgaaatggtggaatca
caattgctctcatgtttgacggagcatttaactgcagagatagttcaactgactgtctct
gacattacaagggcaattgaatggatgaaatgttcgtacttgtatgtgaggatgaagaag
aaccctggaaattatgcagtcaaaaaagccatttctagtgaccgtatagagaagcatttg
caagagatttgtgtgcagaaagttaacgagttatcgatgcatcaaatgatctggaccgat
gaggatggttttctattgaaaccgttagagcctggaaggttgatgacaaagtactatctg
aaatttgattcaatgaaactcataatgcagacccctgtaaactgcaccttagaagatgct
cttcggattatatgtcgtgccggagaaattgcatggatacaactcagacgcaatgagaaa
aagccgctaaacgacattaacaatgacaaagatggtagacttcgatttcatatcctcagt
gacaatgggaaacggaaaaagcgcattcaaaccagagaagagaagatatttgttttggtc
aatgactgcttgactggtgatccttctgttcgtgatctatcactgacccaggacatgaat
tctatatgctcaaatgggtgtcgaattgccaagtgcatgaaagaattttttatatacaaa
aagaactacaaaggggccttgaattcaacccttcttgcaaagtcgttatatcaaaagctc
tgggatgacagtccttacctgctgaagcagttacctggtattggcatggtgacagcaaag
gcattacattcgatggaaattcaatcatttgaagcactagctgaagctgaccccaggaga
atagagataatcactgggagaaaatacccatttggaaaccacattaaggactctctactg
tcactacctccaaaagtcgacctaaaggttgaagaaactgaatgccagatacgaggaaag
tcaaagctaatggtgactttgactaggatgacacaacctctgcaatcaatgaaacgacat
tatgctgatatgattgtcggttcagaagaagataatttgattctctttcatgagaaaata
agggtggatgagttttcaagcccctatagcgcaacaattttcctgtcaaaccctccgcaa
ggaaagctgaatgttaaggctgatcttgtttttgaagaatatattggtattgacctccac
caaaaagttgtattggtaaaggagaggagtttcaacttgaataaccaaatgggaaaaatg
cagcaatcctcttttgctccacctcaggaagtatatgttatagaagatgatgaggaaact
acgtctcaagctccaattaaagatgtcaatagctctataaaatccaaaaggcaaagcgaa
tctgcgcccagtttcaaccttctagatgaagatttggatgaaggtgacgctgaaggaaaa
ttcactagcactttcatgatttacgtttctgttttatttcaccccttttcactaatcact
tgtattcttcctctaattattgaaggagagctttctgtcaaagttaccgaagaggaaaac
aaaatcatgacggagaaaaacatatttgacagcatacgtgaaaaggctaaaagcttccct
gagtttccgccatcaaatatagtccagtctccatcaactgaagctttgattctcacacgg
aagcgcactcgtgagaagcaacttgaatcctatagcgaagtagaagtcctgaatgagtta
ggagaaaatattccaaaatggtctatggccaagtcatatgtagaacccagtgaagcagaa
caaaatgctcacaataccggtaatcatccgattcaaaataaccatatcacagccagaaac
tcagatgcctccaactttatggatgacgcaggtggacttccccctgatcctaaagatttc
cccttcaaatcttttactgaagagacaatatttgatcacatccgcaaaaaagctaagaat
tttcctcagttgaggaaacagcctgagtattgcaccgatgcttttgacgtattgcaaggg
acaaaatgcagtgatgttatgggagattatatactcatctctgatacagaaaacggcgag
gttgagaaagatgtgtatggtagcagggtgagccaaaaggtgaaacaaaacctatattct
ggaagttcttatcaaacatttgggacaaagaatgtcacccctagaatttcaagcaccggt
actgatcaatcatcgattaaaatgcctgcttttgatgtcccagtcttgaagaatagcaaa
gaaaaatccgacccatgcagctcaattgagagtagaaaaaagcagcgccattatcctagt
gtattacaaaagcagtgccgctcattggcgacagcaagtaaaatcagagaagtagaatca
tttcttggatttgagactgtcttttcctttctatga

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