Ziziphus jujuba (Chinese jujube): 107415842
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Entry
107415842 CDS
T04794
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju00040
Pentose and glucuronate interconversions
zju01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107415842
Enzymes [BR:
zju01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107415842
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Gene cluster
GFIT
Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
107415842
NCBI-ProteinID:
XP_015879732
UniProt:
A0A6P3ZIX0
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All DBs
Position
2:complement(join(28178155..28178373,28178659..28178901,28179156..28179807,28180050..28180246))
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AA seq
436 aa
AA seq
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MEEDAKPKLLILCLLLVAFFPALMANIAEFDEVWQNRAREAKKASRAAYNPHPEQVTQNF
NKEVHKALDGLNSTRRSLNKYSGPCMATNPIDRCWRCDKNWATNRKRLADCALGFGHKAT
GGKAGEIYVVTDSSDDDLLNPKPGTLRYAVLQPQPLWIIFAHDMIIKLSEELMVTSNKTI
DGRGANVHIANGAQITLQFVKNVIIHGLHIHDNKAGNGGMIRDSVDHFGFRTHSDGDGIS
LFGSSDVWIDHISMWNCQDGLIDVIMASTAVTISNCHFTHHNEVLLFGGSDTYPDDEVMQ
VTLAFNHFGNGLVQRMPRIRWGFAHVVNNDYTHWLMYAIGGSQHPTIVSQGNRFVAPSNP
FCKEVTKRGYTPESEWKSWNWSSEGDLMVNGAFFVESGSKINNLSNKDMIPAKPGTSVAR
LTRFAGALNCAKDKAC
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagatgccaagcctaaattgctaattctatgccttcttttggttgcattcttt
ccggccttgatggctaacattgcagagtttgatgaggtatggcaaaaccgagctcgagaa
gccaagaaagcttcccgtgcagcgtataatccgcacccagaacaagttactcaaaatttt
aacaaggaagtacacaaggcattggatggtttaaatagcacaaggaggagcttgaataaa
tatagtggtccttgtatggcgacaaacccaattgatcgttgctggagatgtgacaaaaat
tgggctacaaaccgcaagaggttagctgactgtgctttagggttcggacataaggcaaca
ggaggcaaagcaggggagatctatgtagtcaccgattcctcggacgatgacttgttgaac
ccaaaaccaggaacactacgttacgctgtgctccagcctcagcccctctggatcatattt
gcacacgacatgatcattaagctaagtgaagagctaatggtgacaagcaacaagactatt
gatggtcgaggtgctaacgtccacattgccaatggcgctcaaatcactctgcagtttgtg
aaaaatgtgatcatccatggcctgcatatccatgataataaggccgggaatggaggcatg
attagggactctgtcgatcacttcggctttcgaactcacagtgatggtgatggcatctca
ttgtttggatcctcagatgtttggatagatcacatctctatgtggaactgccaagatgga
ctcatcgatgtgatcatggcgtctactgccgttaccatatcaaactgccatttcactcat
cacaacgaggtgctattgtttggtggaagtgatacgtatccggatgatgaggtgatgcaa
gtaactctggctttcaaccattttggtaacggtttggttcagaggatgccaaggatcagg
tggggctttgcccatgttgtcaacaatgactatacccattggctcatgtatgccattggt
ggtagccaacatcctaccatcgttagccagggcaatcggtttgttgctccatcaaaccca
ttttgtaaagaggtgacaaagaggggctatacacctgagagtgagtggaaatcatggaat
tggagttccgagggggatcttatggtgaatggagcgttctttgttgaatctggaagcaaa
attaacaatctctccaataaggatatgatccctgccaagcctggcacatctgtggccagg
ctcacaagatttgcaggtgctcttaactgtgctaaagataaggcatgttaa
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