Ziziphus jujuba (Chinese jujube): 107416119
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Entry
107416119 CDS
T04794
Name
(RefSeq) rRNA (cytosine-C(5))-methyltransferase NOP2C isoform X2
KO
K21971
methyltransferase NSUN6 [EC:2.1.1.-]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zju03016
]
107416119
Transfer RNA biogenesis [BR:
zju03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
107416119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
PUA
Methyltransf_31
FtsJ
RsmF-B_ferredox
Methyltransf_25
PUA_elF2D
Mei5
Motif
Other DBs
NCBI-GeneID:
107416119
NCBI-ProteinID:
XP_060672645
UniProt:
A0ABM4A7E3
LinkDB
All DBs
Position
4:join(7581720..7581803,7581889..7582010,7582680..7583070,7583585..7583732,7583869..7584006,7584790..7584852,7585169..7585290,7585526..7585751,7585932..7586143,7586495..7586595,7587856..7587917,7588226..7588407)
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AA seq
616 aa
AA seq
DB search
MKKARDFFFLATILRSSSFLTLLRPTPQMEDISERYCFKPILRWNPQVEDYFVRAYGPDH
FSRISQALTRPSCYSCVRVNTLKSTPDAVIEKLLAILKEKGDVNSTNNVNLSKTDANCNS
QSLHNCGKAASEQDGVTNTFKESFHSSSISKCQFPGLDYVLFVRGSGPHKIDYGYADGIP
PKEVIVSRKCAEAVLRGAQVFVPGVMACSAHVEKGDVVAVSVAVEQPSADGGWGIGITRG
TVMQGLQTDPYYFQRSGLYIGQGKAMMSRSGIFRITQGVAVDICSRVYQLPSFHDVLEGE
IFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIAILMKDEGEIVAVDRSHNKVLDI
QKLAVEMGLSCITTYKLDALKAVRRRNECDAASNLSCCDDINGMQSSNPVMLQVQKTALE
GLTADEALNGSVSNEKANERTYISKADTRKNIRRMRNGPGRNQSIGGRVENSKGFSPNSF
DRVLLDAPCSALGLRPRLFAGEETIESLRNHGKYQRRMFDQAVQLVRPGGVIVYSTIPEL
EDLVLLATLNFLMDILRNGYNLVRRNWFRGLIHLLLLTLSDFSLPSLLLVPKIPEMIRAI
RIINDISYSLLFAHFS
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagcgagggacttcttcttcctcgcaacaatcctcagaagcagcagctttctc
actcttctaaggcccactcctcagatggaggacatatcagagagatactgtttcaaacca
attctgcgatggaaccctcaggtggaggactacttcgtcagagcttacggacccgatcat
ttctcccgcatttcccaagctctcacgcgcccatcttgctactcttgtgtacgtgtgaat
acacttaaatccacacctgatgctgttattgagaagttgcttgccattttaaaagaaaag
ggggatgtaaactccactaacaatgtaaatctaagcaaaaccgacgccaattgcaattcc
cagagtttgcataactgtggtaaggcagcttcagaacaagatggcgtcacaaatacgttc
aaggagagctttcacagcagttccatttcaaagtgtcagtttccagggttagactatgtt
ctgtttgtcaggggttcaggaccacacaaaattgattatggttatgctgatggtatacct
cctaaggaggtaattgtgagtcgcaaatgtgctgaggcagttcttcgaggtgctcaggtc
tttgttcctggagtaatggcttgcagtgctcatgttgagaaaggagatgtagtcgcagtt
tcagttgctgtggagcagcccagtgctgatggtggttggggcattggcataacacgaggg
actgtcatgcagggtttgcagacagatccttactattttcaacgaagtggcctgtatatt
ggccaaggaaaagcaatgatgtcaaggtctggtatcttccgtattacacaaggagttgct
gtggacatatgtagtagagtatatcaacttccttcatttcatgatgtgcttgagggggaa
atatttcttcaaaatctgcctagtattgtcactgctcatgcactagatcctcagaaaggt
gagcgaatattagacatgtgtgctgcaccaggagggaaaacaactgcaattgcaattcta
atgaaagatgaaggagaaattgtagctgttgataggtcccataataaggtgctggatatt
cagaaattggcagtggaaatgggcctgagttgtataacaacgtataaactggatgctctt
aaagctgttcgtcgaaggaatgaatgtgatgctgcatctaatctatcttgctgcgatgat
atcaatggcatgcaaagttcgaatccagtgatgttacaagtgcagaaaactgctctagaa
gggttgactgctgatgaggctctcaatggaagtgttagcaatgaaaaagcgaatgagaga
acttacattagcaaagctgacaccaggaagaatataagaagaatgcggaatgggccagga
agaaatcagtccataggtggtagggttgagaactcaaaaggtttttcccctaacagcttt
gatcgagtccttcttgatgctccctgttctgcccttggtttgagacctcgtctatttgct
ggagaggaaacaattgaatccttaagaaaccatggaaagtatcaaaggagaatgtttgat
caggctgttcagttagttcgtccgggtggagttattgtgtattcgaccatcccagaattg
gaggacctggtcttgttggccactttgaatttcctgatggatatattgaggaatggttac
aacctggtgaggaggaattggttcagaggtttgatccatcttcttctcttgacactatcg
gatttttcattgccaagtttattgttggttccaaagatccctgaaatgatcagagctatt
aggataattaatgacatatcatattctttgctctttgcccacttttcttag
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