Ziziphus jujuba (Chinese jujube): 107416266
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Entry
107416266 CDS
T04794
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107416266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zju04121
]
107416266
Enzymes [BR:
zju01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107416266
Ubiquitin system [BR:
zju04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
107416266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Pox_Ag35
DUF5364
CDC45
RPA43_OB
GOLD_2
Motif
Other DBs
NCBI-GeneID:
107416266
NCBI-ProteinID:
XP_048327787
LinkDB
All DBs
Position
4:join(5123746..5124237,5125701..5125805,5125883..5126554)
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AA seq
422 aa
AA seq
DB search
MAKFSLVGDEEDGEGPSDARRKRQRTSFASASASTSTSNGVGITFEENQPPPQPLPLTVD
QHEQEEEAESEEEEEEEEQQQLEEEEGAYGEQEAEERDPEEEIEEIDQVPFSTLRVVTRS
RSSSKSIGLSSAADQEGSISVKLTDPDVLDCSICYEPLAIPVFQLMLGMSYAMAAHGLPD
KFVVWQPMDHCSRFMHAEYCENGHVACSSCCGKIEHKCPSCSWPIGYNRCRAIEKVLEAV
RISCSNTKYGCKELVRYSDKKSHESTCIHSPCSCPHPGCNVVSSAGNLYQHFRCKHLDCA
VRFQYNRTFNVALDANERFQILQEQDEGVIFLLNNSSELLGNLLTVSCIWNRSFSGFFYD
IVAKSQGNSLRLQSFTECTKRRSNSILVTTGFLLVPQNFRNSSNELKLELCIWSKDSFPT
NF
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaattctcgttagtgggtgatgaagaagatggggaaggacccagtgatgcgcga
cgcaagagacagaggacctcgtttgcatctgcatctgcatctacctctacctccaatgga
gtcggaatcacctttgaagagaaccaaccacctcctcaacccttgcctttaactgttgac
caacacgaacaagaagaggaagcggaaagcgaagaagaagaagaagaagaagaacaacaa
caactggaagaagaagaaggtgcgtatggtgaacaagaggcagaagaacgagatccagaa
gaggaaattgaagagattgatcaagtacccttttccacactcagagtcgttacgcgaagc
agatcttcctctaaatccattggattatcttcagctgctgaccaggaaggctccatttcc
gtaaaattgaccgacccagatgtccttgattgctctatttgctacgagcctttggcaatt
cctgtcttccagctgatgttgggcatgagttatgctatggctgctcatgggctacctgac
aagtttgttgtgtggcaacccatggaccactgtagcaggtttatgcatgctgaatattgt
gagaatggacatgtggcttgctcttcttgctgcggcaagattgaacataaatgcccttcc
tgctcatggcctattggctataatcgttgccgagctatagaaaaggttttggaagctgtt
agaatatcatgctcaaacacaaaatatggttgcaaagaattagtgaggtacagtgataaa
aaaagccatgagagtacatgcatacactcgccttgttcatgcccccatccgggttgcaat
gttgtctcctcagctgggaacttataccagcactttcgctgtaaacatttggattgtgct
gtacgcttccagtacaaccgcacttttaatgtggcattagatgctaatgagagatttcag
attcttcaagaacaggatgagggtgtcattttcttacttaacaatagctctgaacttctt
gggaatttattgacggttagttgtatatggaaccgctcattcagtgggttcttctatgat
attgttgcaaaaagccagggaaactctcttcgattacaatctttcacagaatgtactaag
agacgttcaaatagcatcctggttacaacagggttccttcttgtacctcaaaattttcgc
aattctagcaatgagctaaagttggaactctgcatatggagtaaagattcatttcctaca
aacttctaa
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