Ziziphus jujuba (Chinese jujube): 107416316
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Entry
107416316 CDS
T04794
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107416316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zju03019
]
107416316
Messenger RNA biogenesis [BR:
zju03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107416316
mRNA degradation factors
5'-3' decay
Decapping complex
107416316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
WH1
Motif
Other DBs
NCBI-GeneID:
107416316
NCBI-ProteinID:
XP_015880287
UniProt:
A0A6P3ZME8
LinkDB
All DBs
Position
11:join(8959169..8959327,8959606..8959646,8959811..8959860,8960469..8960613,8961396..8961452,8961651..8961774,8962072..8962551,8962782..8962838)
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AA seq
370 aa
AA seq
DB search
MSQTGKLMPNLDQQSTKMLNLTVLQRMDPFIEEILITAAHVTFYEFNIENNQWSRKDVEG
SLFVVKRNTQPRFQFIVMNRRNTDNLIENLLGDFEYEIQVPYLLYRNAAQEVNGIWFYNP
RECEEVANLFSRILNAYSKVPSKPKVSSSKSEFEELEAFPSMSVIEGPLEPSPTVSTATE
ASEDPSFVNFFSAAVNIGGATPNVANPRQTYNSSSTMHSSSYGPIVSSPVPTPQVPALSL
SAPSAPISLHSTSDLNSSSGNRVTNLVKPSSFFTPPSSSSSLIMPSISSSMPTGASLHPP
MNIRPYGAPMLQPFPPPTPPPSLTPSSAPPIPNEGPVINRDKVRDALLLLVQDDQFIDMF
YQLLLKVHQS
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaccgggaaattaatgccaaatctcgatcaacagagcaccaaaatgctcaat
ctcactgtgcttcagagaatggatcctttcatagaagagattctaatcacggccgcccac
gtcacgttctacgaatttaacatcgagaacaatcaatggagtcgcaaggacgttgaagga
tctctctttgtggttaagaggaatacgcagccacggtttcagttcatcgtaatgaaccgg
cgcaacactgataacctaattgagaatctattgggtgactttgagtatgaaatacaagtt
ccatacttgttatatcgaaatgctgcccaagaagtcaatggaatttggttttacaatcca
cgtgaatgtgaggaagttgcaaatctctttagtaggatacttaatgcatactcaaaggtt
ccttcaaagcctaaagtatcttcaagcaaaagtgagtttgaggagcttgaagcattccca
tccatgtcagttattgaaggtccgctggagccatcaccaaccgtctccactgccactgaa
gcctctgaagatccttctttcgtgaacttctttagtgcagcggtgaatattggaggtgct
actccaaatgtagcgaatccgagacagacctataattcttcttcaacaatgcattcatct
tcttatggaccaattgtttcctcccctgtaccaactccacaagtaccagccctttctctt
tcagctccatctgcaccaatctcactacatagcacatctgatttaaacagcagcagtggc
aatcgtgttactaatcttgtcaagccctcctcattttttactcccccttcctcatcatca
tcattgattatgccatctatttcttcatctatgccaactggtgcttctcttcatccaccc
atgaacatacgtccatatggtgctccaatgcttcagccctttcctccaccgactccacca
ccatctttaactcctagttcagcacctcccatacccaatgaggggcctgttattaacaga
gacaaagttcgcgatgcccttcttttgcttgttcaggatgatcaattcattgacatgttc
taccaactgctgctaaaggtgcaccaatcatga
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