KEGG   Ziziphus jujuba (Chinese jujube): 107416377
Entry
107416377         CDS       T04794                                 
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju04144  Endocytosis
zju04517  IgSF CAM signaling
zju04519  Cadherin signaling
zju05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:zju00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    107416377
   04519 Cadherin signaling
    107416377
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107416377
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    107416377
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zju04131]
    107416377
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:zju04812]
    107416377
Membrane trafficking [BR:zju04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    107416377
Cytoskeleton proteins [BR:zju04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     107416377
SSDB
Motif
Pfam: Beta-prop_EML_2 Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd WD40_Gbeta EIF3I Tricorn_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_HPS5 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_EIPR1 WDR90_beta-prop_4th RMC1_N eIF2A Ge1_WD40 Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_2nd Beta-prop_ACSF4 PEP5_VPS11_N BNR_3
Other DBs
NCBI-GeneID: 107416377
NCBI-ProteinID: XP_015880348
UniProt: A0A6P3ZN57
LinkDB
Position
4:join(6685603..6685672,6686536..6686621,6687010..6687086,6687295..6687389,6687551..6687620,6689028..6689097,6690169..6690242,6690353..6690395,6691583..6691664,6692574..6692662,6692776..6692861,6693042..6693102,6693437..6693543,6693932..6693990,6694108..6694172)
AA seq 377 aa
MAAIAVHQLAQSITCHAWSPDHSMVAVCPNNNEVHIYRLLQDKWEKMHVLQKHDQIVSGV
DWSARSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
TVCVCYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNILLATASTDGKCRVFSTFIKGVDP
KDSRTGPSSDSKFGEQIVQLDLSFSWSFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLA
QNVAFRDLPLRDVIFVSERLVIGVGFDCNPMVFGADERGIWSFLRFLERKRTSSGPKYGS
QFSEAFGKLYGQSKHGVGNDGIEPSRSRGGVHENFINCVVPLRESGKSTATRFSTSGMDG
KVVIWDLENQTDLSDYL
NT seq 1134 nt   +upstreamnt  +downstreamnt
atggcggcgattgcagtccaccagcttgctcagtccatcacttgccacgcttggagccct
gaccattctatggttgcggtgtgtccgaacaataacgaggtccatatctatagactattg
caagacaaatgggagaagatgcatgttcttcaaaagcatgatcaaattgtctctggggta
gattggagtgcaaggtcaaacagaattgttactgcatctcatgatcgaaattcttatgtc
tggaacctagaaggatcagagtgggtacccacccttgttattcttaggctaaaccgtgct
gcactctgtgttcaatggagtcctaaagaaaataagtttgcagttggaagtggggcaaag
actgtttgtgtttgctactatgagcaagaaaataactggtgggtcagtaaacttatcagg
aaaagacatgattcttctgttacaagtgttgcttggcatcccaataatatccttctggca
acagcatctacagatggaaaatgccgagtgttttccacttttattaaaggtgttgatcca
aaggattcaagaacaggcccttcatcagattcaaagtttggagagcaaattgttcaacta
gatctttcattttcttggtcatttggcgtgaagtggtcaccaagtggaaataccttagca
tatgtaggccataactctatgatctactttgtcgatgatgttggaccatcccctttggcc
caaaatgttgcattccgtgatttgcctctccgtgatgttatatttgtgtctgagagattg
gtcataggtgtgggatttgactgcaacccaatggtttttggagcagatgaaagaggaata
tggagctttctcagattcttagaaaggaagagaacatcttcaggtccaaaatatggttct
cagttttctgaagcatttgggaaactgtatgggcaatctaagcatggagtgggcaacgat
ggaatcgaaccttcgagatcacggggaggcgttcatgagaatttcataaattgtgtcgtg
ccgcttagagagtcaggaaaatctacagcaactcgcttcagtacttcaggaatggatggt
aaagtggtcatttgggatctggagaaccaaacagatctatcagattatttgtga

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