KEGG   Ziziphus jujuba (Chinese jujube): 107417717
Entry
107417717         CDS       T04794                                 
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
  KO
K22803  structural maintenance of chromosomes protein 5
Organism
zju  Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:zju00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zju03400]
    107417717
DNA repair and recombination proteins [BR:zju03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    SMC5-SMC6 complex
     107417717
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_21 AAA_29 AAA_15 Filament ABC_tran Intu_longin_3 AAA_16 AAA_27
Other DBs
NCBI-GeneID: 107417717
NCBI-ProteinID: XP_060670254
UniProt: A0ABM4A0J6
LinkDB
Position
2:join(3692670..3692707,3693068..3693245,3693326..3693479,3693866..3693939,3694065..3694214,3694313..3694417,3694491..3694636,3695391..3695502,3695577..3695732,3695829..3696095,3696195..3696260,3697314..3697442,3697523..3697621,3697886..3698051,3698153..3698298,3698489..3698552,3698649..3698773,3698945..3699022,3699613..3699685,3700470..3700573,3700982..3701098,3701175..3701252,3701453..3701552,3701635..3701689,3701903..3701951,3702036..3702123,3702233..3702305,3702821..3702924,3703029..3703090)
AA seq 1051 aa
MSERRAKRPKITRGEDDYMPGNITEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSLV
CAIALGLGGEPQLLGRATSIGAFVKRGEESGYTKITLRGETEEQQISIMRKIDTRNKSEW
LFNGKAVPKKEVVEVIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLP
IHHRALIEKSKELKNIERAVEKNGETLNQLKALIAEQEKDVARVRQREELLAKAASMKKK
LPWLKYDMKKAEYMEAKAQENDAKKKLDEAAKILNDLKEPVEIQKQEKARLESKSKKIGI
LINENAKMRSELLEMENGLGVRVRGNYQEIEDLKKQEESRQQRILKAKEDLHAAISELKN
MPVYKPPTEEIERLRSQILELEVSLKEKRPQKLEMENQIKQKRVSLRQCTDRLKDMENTS
TKLLHALRNQGAERIFDAYNWVQEHRHEFNKEVYGPVLLEVNVDDRVHADYLEGHVANYI
WKSFITQDSGDRDHLVKNLRSFDVPVLNYVDKESSRKKPFEISEEMHALGIYSRLDQVFN
APLAVREVLISQSGLDRSYIGSKETDQRADEVSNLGISDFWTPENHYRWSTSRYGGHSSA
IVESVDRSKLFLCSLDGGEVEKLKTRKIELEESINDLEESVGSLKTEQRHLEDEAAKLQK
EREEIISIAQHEKKKRREMENRINQKKKKLESMEKEDDLDTAIAKLIDEAAKCNNERFHC
AMKFKNLLVEAVSHKQNFAEKHLASIELDAKIRELEANIKQHEKAALQASMHLEDSKKVV
EDYRQQLSAAKRHAESIAAITPELEKEFLEMPTTIEELEAAIQDNVSQANSMLFLNNNIL
AEYEHRKRQIEGIETKLDADKNELTRHKTEVDNLKQSWLPTLRNLVSQINETFSRNFQEM
AVAGEVSLDEHGVDFDQYGILIKVKFRQAGELQVLSAHHQSGGERSVSTILYLVSLQDLT
NCPFRVVDEINQGMDPINERKMFQQLVRAASQLNTPQCFLLTPKLLPDLEYSEACSILNI
VNGPWIEQPSKVWSSGDCWGTVTGLVEEGRC
NT seq 3156 nt   +upstreamnt  +downstreamnt
atgtcggagcgtcgagctaagcggcccaagatcaccaggggtgaagatgattatatgccc
ggaaacataactgagattgagcttcataacttcatgacttttaatcacttgaaatgcaaa
cctgggtccagactaaatctcgtaattggaccaaatggatctggtaagagctctcttgtc
tgtgcgatagcgcttggtcttggtggtgagcctcagctgcttgggagagcaacaagtatt
ggtgcatttgtgaagcgtggagaggagtctggctatactaagattacattgagaggggag
actgaagaacagcagattagcattatgcgtaaaattgacacgcgtaacaagtctgagtgg
ttgttcaatggaaaagcagtacccaaaaaagaagtagtagaagtcattcaacggttcaac
atccaagtaaacaatttgactcaatttctaccacaagacagggtttgtgaatttgccaaa
ttgactccggtgcaacttctagaagagactgaaaaggctgttggtgaccctcaacttcct
atccaccaccgtgcacttattgaaaaaagcaaggagttgaagaatatagagcgagcggtt
gagaaaaatggagaaactttgaatcagctgaaggcacttattgctgaacaagagaaagat
gttgcaagagtccgtcaaagagaagaacttcttgcaaaggctgcttccatgaaaaagaaa
ctaccatggctaaagtatgacatgaagaaggctgaatatatggaggctaaggcacaggag
aatgacgcgaaaaagaaattagatgaagctgctaaaattttaaatgatctgaaagaacca
gtggagatacaaaagcaagagaaggctaggttggaaagtaaaagcaaaaagataggcatt
ctcatcaatgaaaatgcaaagatgcgttctgaacttttggaaatggaaaacggcttggga
gtgcgtgtacgaggaaactaccaagaaattgaagacttgaaaaagcaagaagaatctcgt
caacaaagaatcttaaaagccaaagaggatctccatgctgcaatatcggaactcaaaaac
atgcctgtgtataaacctcctaccgaagaaattgaaagattgcgctctcaaattctagag
cttgaagtttctctaaaagaaaagaggcctcaaaaattagagatggaaaaccaaataaaa
cagaagagggtatcccttagacaatgcacggacaggttgaaagatatggagaatacaagc
actaagcttcttcatgcattgcggaaccaaggagctgagaggatatttgatgcttataat
tgggttcaagaacatcgccatgaattcaataaggaggtttatggccctgtactgcttgag
gttaatgttgatgatcgggttcatgctgattacttagaaggtcatgttgctaactatatt
tggaagtctttcataactcaagattctggtgatcgggaccatctggtcaaaaacctcagg
tcatttgatgttccagttttaaattatgtggacaaagaaagttcacggaaaaagcccttt
gaaatttctgaggagatgcatgcgcttggcatctattcccgacttgaccaagtttttaat
gctccattagctgtgagggaggtcttgataagccaatctggtttggatagatcatatatt
ggatccaaggaaactgatcagagggctgacgaggtctcaaacttgggaatttctgatttt
tggacaccggaaaatcactacaggtggtctacctctagatatggtggtcattcctcagca
attgtagaatcagtcgaccgttcaaaacttttcttgtgtagtttggatggtggagaagta
gaaaaattgaagacccggaaaatagagctagaagaatctattaatgatttagaggaaagt
gttggatcacttaagactgagcaaagacatttagaagatgaagcagctaaactacaaaaa
gaaagggaggagataataagcattgcacaacatgagaagaagaagcggcgtgaaatggaa
aaccgtattaatcaaaagaagaagaaattagaatctatggaaaaggaggatgacctggat
actgctatagcaaagctaattgacgaagctgcaaaatgtaataatgagcggtttcattgc
gcaatgaaatttaagaatctacttgttgaggctgtttctcataaacagaattttgctgaa
aaacatttggcctccattgaacttgatgccaagattagagaattggaggccaatatcaag
caacatgaaaaagctgcgcttcaagcatcaatgcatctcgaggattccaagaaggtggtt
gaggattatcggcagcaactttcagctgccaagaggcatgcagaatcaattgcggcgatc
acaccggaacttgagaaagaatttcttgagatgcctactacaatcgaagaattggaggct
gctattcaagataatgtctctcaagccaattctatgctctttttaaacaacaatatactg
gcagaatatgaacaccgcaagcgccagattgagggaattgaaacaaaattagatgcagac
aaaaatgagttaacaaggcataaaactgaagtggataacctgaagcaaagttggcttcct
actttgagaaaccttgtttctcaaataaatgagactttcagccgtaacttccaagagatg
gctgttgctggcgaagtttcattagatgagcacggtgtggactttgatcaatatggtata
cttataaaagtgaagttcagacaagcaggagagcttcaagttctcagcgcccaccatcaa
tctggaggggagcgttcagtttcaactattctttatcttgtttctcttcaagaccttaca
aactgcccctttagggttgttgatgagataaaccaaggaatggatcctataaatgaaaga
aaaatgttccagcaattagtaagggctgcaagccagctaaacacacctcagtgtttccta
ctgactccaaagttgctaccggatctggaatacagtgaagcttgcagcattttgaatata
gtgaatggtccttggattgagcagccctctaaagtgtggagcagtggagattgctgggga
actgtcaccggcttagtagaagaaggtagatgctga

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