Ziziphus jujuba (Chinese jujube): 107417909
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Entry
107417909 CDS
T04794
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 36
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zju03009
]
107417909
Enzymes [BR:
zju01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107417909
Ribosome biogenesis [BR:
zju03009
]
Eukaryotic type
90S particles
Helicases
107417909
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
107417909
NCBI-ProteinID:
XP_015882044
UniProt:
A0A6P4A230
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All DBs
Position
2:complement(join(4917891..4918052,4918210..4918308,4918405..4918486,4918574..4918777,4919162..4919484,4919825..4920457))
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AA seq
500 aa
AA seq
DB search
MEQEEILVDQSFPLFKPSKNPKKPPKNPKPTTAAAAEEPATNCSNGEPHIEKSAANLSND
STPTTFAELGLSDWAVETCKELGMRKPTAVQSHCIPKILEGRDVLGLAQTGSGKTAAFAL
PMLHRLAEDPYGVFALVVTPTRELAYQMAEQFRALGSCLHLRCTVIVGGMDMLTQAKSLM
ARPHVVIATPGRLKVLLEENPDIPHVFSKTKFLVLDEADRVLDVGFEEELRVVFQCLPKN
RQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVDTLKQQFILTPENVKDVYLVYLL
SKLEDMGIRSAIIFVSTCRDCHYLSLLLEELGYEAAALHSFKSQSLRLAAIHRFKSGKVP
TLLATDVGSRGLDIPTVDLVINYNVPRFARDYVHRVGRTARAGRGGLAVSFVTQNDVELV
HEIEAVLGKQLEEFECKENEVLSDSTKVWNARRVAKMTMMDDGFDEKVKERKQQKKKTLA
AKGLLNKKIRKRKRGKKSVE
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagaagaaatcttagtagaccaaagcttccctcttttcaaaccttcaaaaaac
cctaaaaaacctcccaaaaatcctaaaccaactaccgccgccgcggccgaagaaccagcc
actaactgctccaacggcgaaccacacattgaaaagtcggcggcgaaccttagcaatgat
tccaccccaaccacatttgccgagcttgggctctcggattgggccgtcgagacttgcaag
gagctgggcatgcgaaagccaacggcggttcagtcccactgcattccgaaaatcctcgag
ggccgcgacgtgcttggtctggcccaaacgggtagcggaaagacggcggctttcgcgttg
ccgatgctgcaccgtttggctgaggacccctatggtgtgtttgcgttggtggtgacgccg
actcgagagctcgcttaccagatggccgagcagtttcgggcactgggctcgtgtttgcac
ttgcggtgcacagttatcgtcggagggatggacatgttgacccaagcgaagagcttgatg
gccaggcctcacgtggtgattgctactccagggaggctcaaggtcttgctcgaagagaat
cctgatattcctcatgttttttccaagaccaagtttctagttttggatgaagcagataga
gttttggatgtgggctttgaagaggaactgagggtggtgtttcagtgcttgccgaagaat
cggcaaaccctgttgttttctgcgacaatgactagtgacctgcaaacgctacttgaactt
tctgctaataaggcctacttttatgaggcatatgaaggatttaagacagttgacactctt
aagcagcagtttattttgacacccgaaaatgtaaaggacgtttatctggtgtacctttta
tctaaattggaagatatgggtattcgctctgccatcatatttgtctcaacctgcagagac
tgtcattatttaagtttattactggaagagcttggttatgaagctgcagcattgcattca
ttcaaatctcagtctttaaggcttgctgcgatacaccggttcaagtctggaaaggttcct
acattgcttgctactgatgttggcagccgtggtttggacattcctacggttgatcttgtc
atcaattataatgttccaaggtttgcgagagattatgttcatcgtgtggggcgtactgca
agagcaggcagaggagggttggctgttagctttgttactcaaaatgatgtagaacttgtt
catgaaatagaagctgttcttgggaaacaattggaagaatttgaatgtaaagagaatgaa
gtcctttcagatagcacaaaggtttggaatgccagaagagtagcaaaaatgacaatgatg
gatgatggatttgatgagaaagtaaaagaacgaaaacaacagaaaaaaaagacgctagca
gccaaaggattattgaataaaaagattagaaagaggaaaaggggaaaaaaatctgttgaa
tga
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