KEGG   Ziziphus jujuba (Chinese jujube): 107418436
Entry
107418436         CDS       T04794                                 
Name
(RefSeq) vacuolar sorting protein 18
  KO
K20181  vacuolar protein sorting-associated protein 18
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:zju00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    107418436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zju04131]
    107418436
Membrane trafficking [BR:zju04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    107418436
   Hops complex
    107418436
SSDB
Motif
Pfam: Pep3_Vps18 Clathrin zf-RING_Vps41 zf_RING_Vps8 zf-RING_11 zf-rbx1 Nup54_57_C zf_RING_Vps8_fungal zf-RING_UBOX TXNDC16_2nd
Other DBs
NCBI-GeneID: 107418436
NCBI-ProteinID: XP_048329359
LinkDB
Position
2:complement(join(11235980..11236153,11236433..11236549,11236927..11237085,11237337..11237492,11237647..11237874,11238347..11238535,11238656..11238761,11238998..11239128,11239216..11239278,11239662..11239740,11240118..11240260,11240734..11240841,11240936..11240995,11241344..11241400,11241514..11241633,11241737..11241880,11242165..11242309,11242534..11242635,11242748..11242815,11243044..11243139,11243259..11243398,11243515..11243727,11244100..11244262))
AA seq 986 aa
MESARQVFTVDLLERYATKGRGVITCMAAGNDVILLGTSKGWVIRHDFGVGDSYDIDLSA
GRPGEQSIHRVFVDPGGSHCIATVVGSGGADTFYTHAKWNKPRLLSKLRGLVVNAVAWNR
QQITEASTKEVIIGTENGQLHEIAVDEKDKKEKYVKFLFELSELTEAFMGLQMETATIMN
GTRYYVMAVTLTRLYSFTGFGSLETVFASYLDRAVHFMELPGEIPNSELHFYIKQRRAVH
FAWLSGAGIYHGGLNFGAQHSSPNGDENFVENKALLGYSKLSEGSEAVKPSSMAVSEFHF
LLLVGNRVKVVNRISEQILEELQFDQTSESISKGIIGLCSDATAGLFYAYDQNSIFQVSV
NDEGRGMWKVYLDMKEYAAALANCRDPLQRDQVYLMQAEAAFASKDYLRAASFYAKINYI
LSFEEITLKFIGVNEQDALRTFLLRKLDNLTKDDKCQITMISTWTTELYLDKINRLLLED
DAAVDNRNTEYQSIIKEFRAFLSDCKDVLDEATTMRLLESYGRVEELVFFASLKEQYEIV
VHHYIQQGEAKKALEVLQRPSVPIDLQYKFAPDLIMLDAYETVESWMTTNKLNPRKLIPA
MMRYSSEPHAKNETHEVIKYLEYCVHRLHNEDPGVHNLLLSLYAKEEDDSALLRFLQCKF
GKRRESGPEFFYDPKYALRLCLKEKRIRACVHIYSMMSMHEEAVALALQVDPELAMAEAD
KVEDDEDLRKKLWLMVAKHVIEQEKGAKRDNIRKAIAFLKETDGLLKIEDILPFFPDFAL
IDDFKEAICSSLEDYNKQIEELKEEMNDATHGADNIRNDISALAQRYAVIDRDEECGVCK
RKILTVGREYQTRGYTSVGQMASFYVFPCGHAFHAQCLVAHVTRCTTESQAEYILDLQKQ
LTLLGGEARRDSNGSLTEESITSMRPADKLRSQLDDAIAGECPFCGDLMIGEISLPFILQ
EEAEQISSWEIKPHNLANQRTLSLPL
NT seq 2961 nt   +upstreamnt  +downstreamnt
atggaatcggcgaggcaggtcttcacggtggatcttctagagagatacgcaacaaaagga
cggggagtgattacatgcatggctgcaggaaacgacgtcattctgttgggaaccagtaaa
ggatgggttattcgccatgatttcggggttggcgattcatacgatattgatctctctgcg
ggtcgtcctggggagcaatccatacacagagtttttgttgatcctggagggagtcactgt
attgctacggttgttggtagtggtggggctgatacgttttatactcatgcgaaatggaac
aagccccgtcttttgagcaaactgagaggtcttgtcgtgaatgccgttgcctggaacaga
caacagattacagaagcttcgacaaaggaagtcattatcggtacagaaaatggtcaactt
catgagattgctgtcgatgagaaagataaaaaggagaagtatgtaaaatttctgtttgag
ttatcagaacttactgaagccttcatgggcttgcagatggaaactgctaccattatgaat
ggaactagatattatgttatggctgtcactcttacacgactttattcttttactggattt
ggatcgctagaaactgtttttgctagttatttggatcgtgctgtgcacttcatggaactt
cctggtgaaataccaaacagtgaattgcatttctatatcaagcaaagaagagctgtacat
tttgcatggctttctggtgctggtatctatcatggaggactaaattttggagcacagcat
agttctccaaatggagatgaaaactttgtggaaaacaaggctcttttaggctattcaaaa
ttgtcagaaggttctgaagcagtgaaacccagttctatggcagtgtctgaatttcatttc
ttgcttctggttggaaatagggttaaggttgtaaatagaattagtgagcaaattttggag
gaactccagtttgatcagacatcagaatcaatttcaaagggaatcattggattatgtagc
gatgccactgctgggttgttctatgcatatgaccaaaactctatttttcaggtgtctgtc
aatgatgaaggccgaggtatgtggaaggtttatttggacatgaaagagtatgctgcagct
ttggcaaattgtcgagacccactccagagggatcaagtatatttgatgcaggctgaagct
gcatttgcttctaaggattatctaagagcagcatccttctatgcaaaaattaactatata
ttatcgtttgaagagattactctgaagttcattggtgtgaacgaacaggatgctttaaga
actttcttgctgcggaagcttgataatcttacaaaggatgataaatgccaaataacaatg
atttcaacgtggacaactgaattgtacttggacaagataaatcgactcctcttggaagat
gatgctgctgtggataaccgtaatacagagtaccaatcaatcataaaagaattccgtgct
tttctcagtgactgcaaggatgtgttggatgaggcaactacaatgagacttttagaaagt
tatggtcgcgttgaagaattggtgttttttgctagtctaaaggagcagtatgaaattgta
gttcatcattatattcagcaaggagaagcaaagaaagcattagaagtccttcaaagacct
tctgttcctatagatcttcagtacaaatttgccccagacctcataatgcttgatgcatat
gaaactgtggaatcatggatgaccactaacaaactcaacccaaggaaactgattcccgca
atgatgcgttattcaagtgaaccccatgcaaagaatgaaacccatgaagtcatcaaatat
ttggagtactgtgttcatcgtttgcataatgaggaccctggagttcataacttgcttctc
tctctatatgccaaagaggaagatgacagtgcactactgagattcctacaatgcaagttt
gggaaacggcgggaaagtgggccagagttcttctatgatcccaagtatgcattgcggctt
tgcctaaaagaaaagcgaattcgtgcatgtgttcatatatacagcatgatgtccatgcat
gaggaagcagttgctcttgcgctacaggttgatcctgagcttgctatggctgaagctgat
aaggttgaggatgatgaagacttgagaaaaaagctttggctcatggttgccaagcatgtc
attgaacaggaaaagggagctaaaagggataatattcggaaggcaatagcatttcttaag
gaaactgatgggcttttaaagattgaggatatattacctttctttccagacttcgccctg
attgatgacttcaaggaggcaatttgctcatcgttagaggattacaacaagcaaattgaa
gaactgaaagaggagatgaatgatgcaacacatggtgcagacaacatcagaaatgatatc
agtgcacttgctcaaagatatgctgtgattgatcgtgatgaggaatgtggggtatgtaag
cgcaagattttaacagtgggtagagagtatcagactcggggctatacatcagtgggacag
atggcatcattctatgtctttccatgtggacatgctttccatgcacagtgcttggttgcc
catgtgacacgctgtacaactgaaagtcaggcagagtatatacttgacctgcagaagcaa
cttacattacttggaggggaggctaggagggattcaaatggtagtttgactgaagaatca
ataacaagcatgaggcctgcagacaagcttcggtcacagttagacgatgccatagccggt
gaatgcccattttgtggggacttgatgatcggtgagatctctctgccatttatcctccaa
gaggaagcagagcagattagttcatgggaaataaagccccataatctggcaaaccaaagg
actctttctttgccattatga

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