KEGG   Ziziphus jujuba (Chinese jujube): 107418688
Entry
107418688         CDS       T04794                                 
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit isoform X1
  KO
K03267  peptide chain release factor subunit 3
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107418688
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zju03019]
    107418688
   03012 Translation factors [BR:zju03012]
    107418688
Messenger RNA biogenesis [BR:zju03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     107418688
Translation factors [BR:zju03012]
 Eukaryotic type
  Release factors
   107418688
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 G-alpha
Other DBs
NCBI-GeneID: 107418688
NCBI-ProteinID: XP_048329535
LinkDB
Position
2:join(13954806..13954809,13956059..13956100,13956267..13956341,13957872..13957934,13958053..13958148,13958369..13958480,13958915..13958960,13959099..13959170,13959596..13959658,13959810..13959964,13960049..13960113,13960738..13960888,13961320..13961425,13961510..13961645,13962018..13962082,13962177..13962341,13962696..13962768,13962845..13962885)
AA seq 509 aa
MDIEEEIRSLQLEPAAEDNGVVNPEEAKHEEVERSDEMEEVSDSKEKVETHSTGSAQVDQ
KVKEKDIPPLEDDLEEMELDRKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYE
KEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMI
SGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLLVVVNKMDDPTVNWS
KERYDEIESKMIPFLKSSGYNVKKDVQFLPISGLLGTNMKTRVDNKSCPWWTGPCLFEAL
DSIEITPRDPNGPFRMPIIDKFKDMGTVVMGKVESGSICEGDSLLVMPNKAQVKVVAVYC
DEDKVRRAGPGENLRVRLSGIEEEDIISGFVLSSVAKPIPAVTEFLAQLQILELLDNAIF
TAGYKAVLHIHAVVEECEIVELLQQIDPRTRRPMKKKILFVKNGAVVVCRIQVNNMICIE
KFSEFAQLGRFTLRTEGKTVAVGKVTDLA
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggatattgaagaggagattcgatcattacagcttgagccggcagcagaagacaatggt
gttgttaatccagaagaggctaagcatgaagaagttgagagatctgatgaaatggaggaa
gtttcagattcaaaggagaaggttgaaacacattccactgggtcagcccaagttgatcaa
aaagtgaaagagaaagatattcctcccctagaggatgatctagaggagatggaattagat
aggaagagacacttgaatgttgtattcattggtcatgtggatgctggtaagtccaccact
ggaggccagatacttttccttagtggacaggttgatgaccgaacaatccaaaaatatgaa
aaagaagcaaaggataaaagtagggaaagctggtatatggcatatattatggacaccaat
gaagaggagagggttaagggaaaaacagttgaagttggacgagcacattttgaaacagag
acaactagatttacaattttggatgcaccaggtcacaagagttatgtcccaaatatgatt
agtggtgcatctcaagctgatattggagtacttgttatttctgctcgaaaaggagaattt
gaaactgggtatgagagaggtggacagacccgtgaacatgtccagcttgcaaaaactttg
ggtgtctctaagctgcttgttgtcgtgaataaaatggatgatcctacagtgaattggtct
aaagaaaggtacgatgaaattgagtcaaagatgataccatttctgaagtcatccggctac
aatgtgaaaaaagatgtccagttcctgccaatatctggcctgctgggtacaaacatgaaa
actagagttgataataaatcatgtccatggtggactggtccctgcctctttgaagccctt
gactccattgaaattactccacgagatccaaacggtccattcaggatgcctattatagac
aaatttaaagacatgggaactgttgttatgggcaaagtagagtccggtagcatttgtgaa
ggtgattcactgttggtgatgccaaataaggctcaagtgaaagttgttgctgtatactgt
gatgaagataaggtcagacgtgcaggacctggagaaaatctacgagttaggttatcagga
attgaggaagaggatataatctcgggttttgttttatcaagtgttgcaaaaccaatacct
gctgttactgagtttcttgcccagctgcagatccttgaattgctggataatgcaatcttt
acagctggctataaggctgtcttgcacattcatgctgttgttgaagagtgtgagattgtt
gagctgttacagcagattgatccaaggacaaggagaccaatgaaaaagaaaattctcttt
gtgaagaatggtgctgttgttgtatgccggattcaggtgaataatatgatatgtattgag
aagttctcagagtttgcgcagcttggaaggtttacgcttcgtactgaaggaaaaacagtt
gcagttgggaaagtcactgatcttgcttga

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