Ziziphus jujuba (Chinese jujube): 107418746
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Entry
107418746 CDS
T04794
Name
(RefSeq) cyclin-dependent kinase D-3 isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03022
Basal transcription factors
zju03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107418746
09124 Replication and repair
03420 Nucleotide excision repair
107418746
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
zju01001
]
107418746
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zju03021
]
107418746
03019 Messenger RNA biogenesis [BR:
zju03019
]
107418746
03400 DNA repair and recombination proteins [BR:
zju03400
]
107418746
Enzymes [BR:
zju01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
107418746
2.7.11.23 [RNA-polymerase]-subunit kinase
107418746
Protein kinases [BR:
zju01001
]
Serine/threonine kinases: CMGC group
CDK family
107418746
Transcription machinery [BR:
zju03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107418746
Messenger RNA biogenesis [BR:
zju03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
107418746
DNA repair and recombination proteins [BR:
zju03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107418746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Kinase-like
ABC1
Haspin_kinase
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
107418746
NCBI-ProteinID:
XP_015882932
UniProt:
A0A6P4AB77
LinkDB
All DBs
Position
2:join(15057622..15057723,15058059..15058357,15058445..15058553,15059060..15059185,15059771..15060006,15060084..15060392,15060843..15060900)
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AA seq
412 aa
AA seq
DB search
MAENDPSKKMSRYLKREVLGEGTYGVVYKAIDTETGQTMAIKKIRLGRQKEGINFTALRE
IKLLKELKDPNIIQLSDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMTL
KGLAYCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPE
LLFGAKQYGSGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTASQWPDMVY
LPDYVEYQYVPAPPLRSLFPMASDDAIDLLAKMFTYDPKSRISVVQALEHRYFSSAPLPT
DPPKLPRPAPKSKASDSNAREGPTVLSPPRKSRRVMPDREVSEGLTYQGDKNDDHGGEIR
QAIGENTSRNEPVPMSMDFSIFGAKPPNRPTINSADRTHLKRKLDLEFQHPE
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaacgatccatcaaagaaaatgtccagatatctgaaacgagaagtccttggt
gaaggtacttatggagtcgtttataaagcaattgatactgagacgggacagacaatggca
attaagaaaattcgtcttggaaggcaaaaggaagggataaattttacagcacttagagag
atcaaactgctaaaagagctcaaggatccaaatataattcagttgagtgatgcattcccc
cacaaaggaaacttacatcttgtgtttgagttcatggagacagaccttgaagctgttata
cgtgaccggaatatattcctatcaccagctgacataaaatcataccttcagatgacatta
aaaggacttgcttactgccacaaaaaatgggtattgcatagggacatgaagcccaacaat
ctcttaataggatctaatggacaacttaagcttgcagattttggtttagcacgaatcttt
ggaagcccagatcggaggttcactcatcaggtctttgctcgatggtatagagcacctgag
ctattgtttggtgccaagcaatatggttctggtgtggatgtttgggctgcagcttgtatt
tttgctgaacttctcctacgtcgaccttttcttcagggatcaagtgatattgatcaacta
ggaaagatatttgctgcttttgggactccaacagcttcccagtggcctgatatggtgtac
cttcctgactatgtggaataccaatatgttcctgcaccccctttacgttcattgttccca
atggctagtgatgatgctattgacctgttagcaaaaatgtttacttatgatccaaagtct
aggatatccgttgtgcaggcgttagagcacaggtacttttcatctgcgcctttgcctaca
gatccaccaaagcttcctagacccgctcctaaatctaaagcttcagattctaatgcacgc
gaaggtccaactgtattgtcacctccaagaaagtcaaggagagtgatgccagatcgtgag
gtttctgaaggacttacatatcaaggtgataaaaatgatgatcatggtggtgaaatcaga
caggcaattggcgagaatacaagtaggaatgaaccagtgccaatgtcaatggatttctca
atttttggagcaaaaccaccaaataggcctacaattaatagtgctgatagaacgcacctg
aaaaggaagctggatcttgagttccaacacccagaataa
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