Ziziphus jujuba (Chinese jujube): 107418909
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Entry
107418909 CDS
T04794
Name
(RefSeq) WD-40 repeat-containing protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03082
ATP-dependent chromatin remodeling
zju03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107418909
03083 Polycomb repressive complex
107418909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zju03036
]
107418909
Chromosome and associated proteins [BR:
zju03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
107418909
Histone modification proteins
HAT complexes
HATB complex
107418909
HDAC complexes
Sin3A-HDAC complex
107418909
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
107418909
PRC2.2
107418909
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
107418909
Heterochromatin formation proteins
Other heterochromatin formation proteins
107418909
Chromatin remodeling factors
NuRD complex
107418909
NuRF complex
107418909
NuRF complex (fruit fly)
107418909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
WD40_RFWD3
EIF3I
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
Beta-prop_RIG_1st
eIF2A
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SPT8
MIOS_WD40
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
107418909
NCBI-ProteinID:
XP_015883092
UniProt:
A0A6P3ZQH8
LinkDB
All DBs
Position
1:complement(join(13805036..13805261,13807508..13807603,13807710..13807834,13808290..13808442,13808838..13809164,13809460..13809804))
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AA seq
423 aa
AA seq
DB search
MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDRQEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLEDAENDARHYDDDRADAGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNQFIIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTE
GYGLSWSTFKEGHLLSGSDDAQICLWDINATPKNKTLEAMHIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQYLHIWDLRTPTVSKPVQSVIAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKIGTTLHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQMAENIYHDEDDLPEEST
KTA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagacgaggaggagatgaggggagaaatagaggagaggctgattaacgaggag
tacaagatatggaagaaaaacacgccctttctgtacgatttggtcatcacgcatgcccta
gaatggccttcgctcactgtcgaatggcttcccgatcgtcaagaacctccagggaaggac
tattccgtccagaaaatgattctcgggactcatacctccgagaacgagcccaattacctc
atgcttgctcaggtccagcttcctctggaagatgccgagaacgatgctcgccattacgat
gacgatcgagccgatgctggtggatttgggtgtgccaacggcaaggtacaaataatacag
cagataaatcatgatggagaggttaatcgggctcgttatatgcctcaaaaccaatttatt
attgcaactaagactgttagtgccgaagtttatgtttttgattatagcaaacacccatcg
aagccccctttggatggtgcgtgtagtccggacttgaggctcagggggcacagcactgaa
gggtatggtttatcatggagtacgtttaaagagggccatttacttagtggttcagatgat
gcacagatatgcttgtgggatatcaacgcaacacctaaaaacaaaaccctagaggctatg
catatttttaaggtgcatgagggtgtcgtagaagatgtagcatggcatttgaggcatgaa
tacttatttggttcagttggtgatgatcaatatctgcatatatgggatctccggactccg
acagttagcaagccagttcaatctgtcatagctcatcaaagtgaggttaactgcttggct
tttaatccctttaatgaatgggttgttgcaactggatccactgacaaaactgttaagctg
tttgatcttcgcaaaatcggtaccacactccacacttttgattgtcacaaggaggaggtt
ttccaagttggatggaatccaaaaaatgagaccatcttggcttcttgttgccttggacgg
aggctcatggtgtgggatcttagcagaattgacgaagagcaaacaccagaggatgctgaa
gatggcccaccagagttgctgtttattcatggtggtcacacaagtaaaatatctgatttt
tcctggaacccatgtgaagattgggtcattgctagcgttgctgaagataacattctccaa
atctggcagatggctgaaaacatctaccatgatgaagacgatttacccgaagaatcaaca
aaaactgcttaa
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integrated database retrieval system
