KEGG   Ziziphus jujuba (Chinese jujube): 107419046
Entry
107419046         CDS       T04794                                 
Name
(RefSeq) U3 snoRNP-associated protein-like EMB2271
  KO
K14793  ribosomal RNA-processing protein 9
Organism
zju  Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:zju00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:zju03009]
    107419046
Ribosome biogenesis [BR:zju03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    107419046
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_EML Beta-prop_TEP1_C EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_SPT8 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_RIG_1st Beta-prop_WDR19_1st RACo_C_ter
Other DBs
NCBI-GeneID: 107419046
NCBI-ProteinID: XP_048323332
LinkDB
Position
1:join(243853..244271,244993..245335,245872..246096,246479..246707,247033..247211,248034..248099,248592..248669)
AA seq 512 aa
MKNKKGSRPKVKKVSLVKDPFFAAESKKRRKPDGASGKGNVIESSESDDDFIGGSDRDAV
EEADADEFVKETADEARKRLATAAFEKFRKNGPKKMDEEDDEGVSGKESEDGQKDSLVAQ
ILLQQQLEESGRVRRAIASRVKKPEDTDEFRVLVKHRQSVTAVVLSEDDLKGFSASKDGT
IMHWDVDSGKGEKYQWPSEEVLRSHGAKDPQGRATKHSKQVLALAVSSDGRYLASGGLDR
HVHIWDTRTREHIQAFPGHRGPVSCVTFRQGTSELFSGSYDRTVKIWNAEDRAYLNTLFG
HQSEVLNMDCLRKERVLTVGRDRSMQLFKVPEESRLVFRAPASSLECCGFVSNDEFLSGS
DDGSIELWSVLRKKPVCIFKNAHALLTANNNFEQKDGNRIPDGHLENDDLTSEKYGSSSA
YSWVSSITVCRSSDLVASGAANGYVRLWAIGSDTKDLQPLYNLPLVGFVNSLAFAKSGEF
LVAGVGQEPRLGRWGRIPAARNGIAFHSLKLS
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgaagaacaagaaaggttcacgtccgaaggtcaagaaggtttcgctcgtcaaagaccct
ttcttcgccgcagaatccaagaagcggcggaagccggacggtgccagtggaaaaggtaat
gttatagaaagcagcgaatcagacgatgattttattggcggctccgatagggacgctgta
gaggaagccgatgccgatgagtttgtgaaagagactgccgatgaggccaggaagaggctg
gcgactgccgcttttgagaagttccggaaaaatgggccgaaaaagatggatgaggaggat
gacgaaggagttagtggcaaggaaagtgaggatgggcagaaggattcgcttgtcgcccag
attttgctgcagcagcagcttgaggagagtggtcgggtgaggagagctatcgcttcgagg
gttaaaaagccggaagacactgatgaattcagagttttagtgaagcaccgacaatctgtc
actgctgtggttctatccgaagatgacttgaagggcttttcagcttccaaggacggcact
attatgcattgggatgtagatagtgggaaaggtgaaaaataccaatggccaagtgaagaa
gtactaaggtcccatggggccaaagatccacaaggccgagcaacaaaacatagtaaacaa
gtgctagcattggctgttagctcagatggacgatatttagccagtggaggattagaccgc
catgttcatatatgggatacacgtacacgagagcatattcaggcattccctggtcacaga
ggacctgtttcgtgtgtaacatttaggcaaggtacttcagaacttttttctggttcatat
gatcgaacagtcaagatatggaatgcagaagatagagcttatttaaatacattatttggt
caccaaagtgaagtattaaatatggattgcttacgaaaagagcgggtattgaccgttgga
cgtgatcggagtatgcagttgtttaaggtccctgaggagtcacgtttagtgttccgtgcc
cccgcatcatctttggaatgctgtggttttgttagtaatgatgaattcttatctggatca
gatgatggaagcattgagctatggagtgttctaagaaagaagcctgtttgcatttttaaa
aatgctcatgccttgttgactgcaaacaataattttgaacagaaggatggtaatagaatc
cctgacggccacctagaaaatgatgacctgacatctgaaaagtatggctcttcttctgca
tattcgtgggttagttcaattactgtttgtagaagcagtgatcttgttgcatcaggagct
gctaatgggtatgttcgtttatgggctattggaagtgacaccaaagacttacagccttta
tacaaccttccattggttgggtttgttaattcgttggcttttgcgaaatctggagaattc
ctggtggctggagttggacaggaacctcgattaggaaggtggggacgtatccctgctgct
cgaaatggaattgcatttcattctctgaagctttcttaa

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