KEGG   Ziziphus jujuba (Chinese jujube): 107419053
Entry
107419053         CDS       T04794                                 
Name
(RefSeq) histone deacetylase 5 isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:zju00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zju03036]
    107419053
Enzymes [BR:zju01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     107419053
Chromosome and associated proteins [BR:zju03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     107419053
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 107419053
NCBI-ProteinID: XP_048328868
UniProt: A0ABM3II27
LinkDB
Position
2:complement(join(23558724..23558889,23559045..23559109,23559237..23559369,23559551..23559744,23560036..23560157,23560240..23560366,23560775..23560861,23561088..23561258,23561577..23561641,23561972..23562183,23562498..23562610,23562801..23562947,23563108..23563312,23563617..23563783))
AA seq 657 aa
MEVSDGEASSQRRLVGLLYDERMCKHHTPDGEPHPENPNRIRAIWNKLQSAGIHHRCVLF
DAKEAEDKSILAVHSVNHVNLIKDISSNQYSEKARARIASMYNSIYFNEGSSEAAYLAAG
SVIEVTEKVAKGELNSGVAIVRPPGHHAERDEAMGFCLFNNVAVATSYLFNEKPELGINR
VLIVDWDVHHGNATQKMFWEDPLVLFFSVHRHEFGSFYPATEDGYYTKVGKGPGAGYNIN
VPWENGLCGDADYLAVWDHILIPVAKEFNPDIIIISAGFDAAIGDPLGGCRVTPYGYSVM
LKKLLNFANGKIVLALEGGYNLESIANSMLACVKVLLEDNPIPGSSEAYPFESTWRVIQA
VRQELSPFWPVLVDELPKKLISQTAPTVPYYLSSSSDSDVEENKGPDAVSENLEDVLRGV
IEPLSKLKVGEDKMASNSMTWRSELSKIHIWYSSFGSNMWRPRFMCYIQGGQVEGLQRPL
PGCMDKSPPKGTLWKILPYRMFFGRNFSRSWGPGGVAFINPEVNIHEKTYMCLYRITLEQ
FNDVLLQENDPSVTLSSPLFDLTALNSIMTGTSKSQEINMEKGWYRNVTYLGKVGDLPIL
TLTCRLSEVEGFRSGKIPLCPPGKSYTNILLRGLVEGKQLSEEEAIAYIQEAATKPL
NT seq 1974 nt   +upstreamnt  +downstreamnt
atggaggtttcggatggggaggctagcagtcagcggaggctagtgggtttgttgtacgac
gagaggatgtgtaaacaccacacccccgacggtgagccccatcctgaaaaccctaatcgt
atacgagcaatttggaacaagctccaatccgctggcatacatcataggtgtgtcctgttt
gatgccaaagaagctgaagataaaagtattttggcagttcattccgtaaatcatgtgaac
ttgattaaggatataagctccaatcagtattccgaaaaagccagagccaggattgcgtct
atgtacaattccatatatttcaatgaaggatcatctgaagctgcatatcttgcagcaggt
tctgtaatagaggtaaccgaaaaggttgctaaaggtgaattaaattctggtgtcgctatt
gttaggcctccaggacatcatgctgaacgagatgaagcaatgggattttgtctattcaac
aatgtggctgttgcaaccagttacctgtttaatgaaaaaccagaattgggcattaaccgg
gttttaattgttgattgggatgttcaccatggaaatgctacacaaaagatgttttgggaa
gatcctcttgttttattcttctctgttcataggcatgagtttgggagcttttatcctgct
actgaagatggttactatactaaggttggaaaaggaccgggtgcaggatataatataaat
gttccatgggagaatggtctgtgtggggatgcagactatcttgcagtttgggaccacatt
ttaattcctgttgccaaggaatttaatccagacattattataatctctgctggatttgat
gcagccattggtgatccccttggaggttgtcgtgttacaccatatggatactcagtaatg
ctgaagaagctgttgaattttgccaatggtaagattgtattggctttagaaggaggatac
aatctcgagtccatagcaaattcaatgcttgcttgtgttaaagttctcctagaagacaat
cctattcctggatcctctgaggcctatccatttgagtcaacatggcgagtaatacaagcg
gttcgccaggaattgagtcctttctggcctgttcttgtagatgaactaccaaagaagttg
atcagtcaaacagcacctacagttccgtattatctgtcctcaagttctgattccgatgtg
gaggaaaacaaaggtccagatgctgtatctgaaaatcttgaagatgttcttcgtggtgtt
atagagcccctctcaaagttaaaagttggtgaagataaaatggcaagcaattccatgacc
tggagatcagagctttcaaagattcacatatggtatagcagttttggatcaaatatgtgg
agaccaagattcatgtgctatattcaaggtgggcaggtggaaggcttgcaaagaccatta
cctggctgcatggataaatctccaccgaaggggacactctggaagatattaccataccgc
atgttctttggtcgaaacttttctcgttcatggggtcctggaggggtcgcttttattaat
cctgaagtcaacatccatgaaaaaacttacatgtgcctgtacagaattacgcttgagcag
ttcaatgatgttttgctgcaagaaaatgatcccagtgtcaccctcagttctcctttgttt
gatttgactgctttgaactcgatcatgactggaacgtccaagtcgcaggagattaacatg
gagaagggctggtaccgtaatgttacctacctgggaaaggttggtgatctccctatattg
actttaacgtgtagactttcggaagttgagggcttcagatctggaaagattcccttgtgt
cccccaggcaaaagttacacaaatatcttacttagaggtctggtagaaggaaaacagctt
tctgaagaggaggcaatcgcctatattcaagaagctgcaactaaaccattgtga

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