Ziziphus jujuba (Chinese jujube): 107419134
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Entry
107419134 CDS
T04794
Name
(RefSeq) probable pectate lyase 16
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju00040
Pentose and glucuronate interconversions
zju01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107419134
Enzymes [BR:
zju01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107419134
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
POTRA1_3_Toc75
Motif
Other DBs
NCBI-GeneID:
107419134
NCBI-ProteinID:
XP_015883363
UniProt:
A0A6P4A5J0
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All DBs
Position
2:join(24838160..24838408,24838551..24838906,24838996..24839131,24839404..24839625)
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AA seq
320 aa
AA seq
DB search
MTSNMGKGLTYYKVTDPSDNAVDPKPGTLRYGAALIKGKVWITFQRDMNIKLEKPLLISS
FTAIDGRGVNVHIANNACLLIFKASNIIIHGLQIHHCKSQGPSSVMGPDGKVIPLGQVDG
DAIRLVTASKVWIDHNTLYQCQDGLLDVTRGSTDITVSNNWFRDQDKVMLLGHDDGYLRD
KNMRVTVMYNHFGPNCNQRMPRVRFGFAHVVNNLYQGWTQYAIGGSMKPSVKSEANLFIA
NRSGNKEVTWRRDSVGDKNSWKFYSVRDVFENGASFLQTGFQGAKPNYNRQQNFQVIDAK
YLRSLTRSAGALRCTRKLRC
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcaacatgggaaaaggcctcacatactataaagtcacagatcctagtgataat
gcagttgatccaaaaccagggactttgagatatggagcagctttaattaaagggaaagtt
tggatcactttccaaagggacatgaacatcaagcttgagaaaccacttcttattagtagc
ttcactgccattgatggaagaggtgttaacgttcacattgctaataatgcatgcttgttg
atctttaaggcaagcaacattatcatccatggtcttcaaatccaccactgcaaatctcaa
ggaccaagctcagttatgggaccagatggaaaggtaattccactaggtcaagtagatggg
gatgcaatcagattggtcactgcatcaaaggtttggattgaccataatacactctatcaa
tgccaagatggtctcctcgatgtcacacgtggctctaccgatatcacagtctcaaataac
tggttcagagaccaagacaaggtaatgcttcttggtcatgacgatggttacttgcgcgac
aagaacatgagggtgactgtcatgtataatcattttggacccaactgcaaccaaagaatg
ccaagagttcgctttggatttgcacatgttgtgaacaacttgtaccaaggatggacacag
tatgctattggaggaagcatgaaacctagtgtaaagagtgaagccaatctcttcatagct
aacagatcagggaacaaagaggtgacttggagaagggacagtgttggggataagaactca
tggaaattttactcagtgagggatgttttcgaaaatggagcttctttcctccaaacaggt
tttcaaggagcaaaaccaaactataaccggcagcaaaatttccaagttatagatgcaaaa
tatttaaggtcattgacaagatcagctggtgctttacgatgcaccagaaaattaagatgc
taa
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