Ziziphus jujuba (Chinese jujube): 107419371
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Entry
107419371 CDS
T04794
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107419371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zju03000
]
107419371
03021 Transcription machinery [BR:
zju03021
]
107419371
Transcription factors [BR:
zju03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
107419371
Transcription machinery [BR:
zju03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107419371
RNA polymerase III system
TFIIIB
107419371
RNA polymerase I system
SL1/TIF-1B
107419371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
107419371
NCBI-ProteinID:
XP_015883624
UniProt:
A0A6P4A659
LinkDB
All DBs
Position
4:complement(join(33763658,33763816..33763889,33763991..33764092,33764638..33764730,33764934..33764978,33765216..33765266,33765650..33765721,33765983..33766070,33766648..33766724))
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AA seq
200 aa
AA seq
DB search
MTEQGLEGSQPVDPNKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEEQSKLAARKYARVIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLHYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFMSGKIVLTGAKVRDE
TYTAFENMYPVLREFKKNRQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgacggaacaaggcttggaaggaagccaaccagtagatcccaataagcatccttcgggg
atcgttcccaccctccagaatattgtctccactgttaatttggattgcaagttggatctt
aaggccattgcactgcaagcaagaaatgctgaatacaatcccaagcgttttgcagctgtc
attatgagaataagagaaccgaaaaccacagcattgatatttgcatctggtaagatggtt
tgtactggagctaagagtgaagaacaatctaaactggcagcacgtaagtatgctcgagtc
atccagaaacttggttttcctgctaaattcaaggatttcaagatccagaatatagtaggt
tcctgtgatgttaaattcccaataaggcttgaaggtcttcattactctcatggtgctttc
tcaagttatgaaccagaacttttcccaggcttgatttaccggatgaaacaaccaaagatt
gtgcttctcatctttatgtcaggaaaaattgttcttacaggagctaaggtgagagatgaa
acctatacagcttttgagaacatgtacccggtccttagagagttcaagaaaaatcggcaa
tga
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