Ziziphus jujuba (Chinese jujube): 107419658
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Entry
107419658 CDS
T04794
Name
(RefSeq) E3 ubiquitin-protein ligase RING1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zju04131
]
107419658
04121 Ubiquitin system [BR:
zju04121
]
107419658
Enzymes [BR:
zju01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107419658
Membrane trafficking [BR:
zju04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
107419658
Ubiquitin system [BR:
zju04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107419658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING_16
zf-HC5HC2H
zf-RING-like
zf-C2H2_DHX34
CxC4
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
107419658
NCBI-ProteinID:
XP_015883912
UniProt:
A0A6P4A6U9
LinkDB
All DBs
Position
2:complement(33511095..33512213)
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AA seq
372 aa
AA seq
DB search
MSSSGGSLGGAGVAGTAGAGAPQLYFCHVCDRTVTLTPSPTSDLLCPVCNGGFVEELGTP
PNPNPNTFLPFSHESPSLGAAGFPFLFSTAASSGPTSGPATVVDDLSALFGAGPTRNQHL
TFQDPDAFNPFLFLQNYLQTLRANGANVQFVIDSGGSGDPAGFRVPSNLNLGDYFFGPGL
EQLIQQLAENDPNRYGTPPASKSAIQGLPVVKISEELLASDSSQCAVCKDTFELGEEAKQ
MPCKHIYHSDCIVPWLELHNSCPVCRYELPTDDPDYEQRTREGSGVGNQSRTGGGFNASS
GGNDGGTGTGAASGENPPTPRSFRVSLPRLFRVFGSPAETSNSGSGNNDGATNTGNRGNP
NSGPEPRQEDLD
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctctggcggcagcttagggggtgcaggagtagccggtacggccggcgcagga
gcgcctcagctgtacttttgccacgtgtgtgatcgcaccgtcactctaaccccttcacct
acctctgatctcctttgtccagtctgcaatggtggtttcgtcgaagagctcggaacccct
ccaaaccctaaccctaataccttcctccccttctctcatgaatccccttcgttgggcgcc
gccggattcccgttcctcttctcgacagctgcttcctcagggcccaccagtggtcccgcc
accgtcgttgatgatctctcggcccttttcggcgccggaccgactcgaaaccaacatttg
acgttccaggaccctgacgcgttcaacccctttttgttccttcagaactatttgcaaacc
ctaagggctaatggtgcgaacgttcagttcgtgatcgatagcggcggctctggtgaccct
gctgggttccgtgtgccttcgaatcttaatctgggtgattactttttcggtccggggctc
gagcaattgattcagcagctggctgagaatgatcccaataggtatggtactccgccggcg
tcgaaatctgcaattcaggggcttccggtggtgaagatttccgaggagcttttggcttcg
gattcttcgcagtgtgcggtttgcaaggacacgttcgagcttggcgaagaggctaaacag
atgccttgtaagcacatttaccattcggattgtattgttccatggttggagttgcacaat
tcttgccctgtgtgtcggtatgagctgccaactgatgatcctgattacgagcagaggact
cgtgagggctctggggttggaaatcaaagtcgaactggtggtgggttcaatgcttcttct
ggtggcaatgatggtggaactggaactggggcagcttctggagaaaatcctcccacacca
cggagttttcgggtctccttgccgcggttgtttagggtatttggttcacctgctgagact
agcaacagtggaagtggcaacaatgatggagcaacaaacacgggaaataggggaaatcca
aacagtggaccagagcctagacaagaagatcttgattaa
DBGET
integrated database retrieval system
