KEGG   Ziziphus jujuba (Chinese jujube): 107419740
Entry
107419740         CDS       T04794                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03020  RNA polymerase
zju03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107419740
  09124 Replication and repair
   03420 Nucleotide excision repair
    107419740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zju03021]
    107419740
   03400 DNA repair and recombination proteins [BR:zju03400]
    107419740
Transcription machinery [BR:zju03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     107419740
DNA repair and recombination proteins [BR:zju03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      107419740
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 107419740
NCBI-ProteinID: XP_060671051
UniProt: A0ABM4A2T9
LinkDB
Position
2:join(30357802..30357856,30359265..30359373,30359535..30359647,30359691..30359701)
AA seq 95 aa
MKNVKEEEEDASVLKPGDDFSKAKCPMNCEVSILLVHRCDQLKHMSDDSLKQLPQVFEKV
LQYVKRFSHFTNQDAVKQVREYPSFLIIFLSHIAI
NT seq 288 nt   +upstreamnt  +downstreamnt
atgaagaatgttaaagaagaggaagaagatgcttcggtgctcaaacctggtgacgatttt
tcaaaggccaaatgtccaatgaattgtgaggtttccattcttcttgtgcatagatgcgac
caactcaagcatatgtctgatgattctttgaaacaacttccacaagtgtttgagaaagtg
ctgcaatatgttaaacgtttcagccacttcactaatcaggatgctgtaaagcaagttaga
gagtatccttctttcttaataatttttctttcacacattgcaatttga

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