Ziziphus jujuba (Chinese jujube): 107419827
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Entry
107419827 CDS
T04794
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107419827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zju03021
]
107419827
03036 Chromosome and associated proteins [BR:
zju03036
]
107419827
Transcription machinery [BR:
zju03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107419827
Chromosome and associated proteins [BR:
zju03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107419827
PBAF complex
107419827
GBAF(ncBAF) complex
107419827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
DUF2536
Motif
Other DBs
NCBI-GeneID:
107419827
NCBI-ProteinID:
XP_015884127
UniProt:
A0A6P4A7E0
LinkDB
All DBs
Position
5:join(822478..822667,822798..823222,823359..823745,824289..824427,824608..824741,824819..824971)
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AA seq
475 aa
AA seq
DB search
MVMEEEKSQKSMSPGKQSQPVKPETAASDSQDAVAAKPSPALNAPSSRPSSDADVAAHLP
SYSSWFSWDKIHECEVRLVPEFFESRSAWKSPRVYMYYRNSIIKQYRDQPSRKITFTEVR
KSLVGDVGSIRRVFDFLEAWGLINYSPSALQNKLLKWDDKDSKPSSSDPPAPPPPPPPTS
KDDVSKRNCNHCKSLCSIACFVCDKYDMTLCARCYVRGNYQVGVSSSDFRRVEINEDSKS
DWLDKDTLHLLEALLHHGDDWRKVAQHVGRSEKDCVSHFIKLPFGEEFVDRECFQSMDPR
HADCGPDTPATTSSSTKRMRLTPLADASNPIMAQAAFLSALAGVEVAENAACAAVTMLSQ
VDYRSSGGARGPQDTNTRWNKVDAASNGNTNLNTAAEGAWLDANSQLEKEELDVERAISG
ITEVQMKEIQDKIVHFEALDLQMEKEWRQLEQMKNMLFVDQLTFLFHKSSAQKTG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggaggaagagaagagtcaaaaatccatgtccccgggcaagcagagccagccc
gtgaaacctgaaacagcggccagcgactcccaggacgccgtggcggcgaagccaagccca
gccctaaacgcccccagttcccgtccttcctccgatgccgatgtagccgcccacctccct
agctattccagttggttttcgtgggacaaaatccacgaatgcgaagtgcggttggtgccg
gagttcttcgaatcgcggtctgcatggaaatcgccaagagtttatatgtactaccgcaac
tccataatcaagcagtacagagaccagccatcgcggaagatcacgttcacggaggtgcgg
aagagtctagtgggggatgtgggatcaatacgcagagtgtttgattttctggaagcttgg
ggactcatcaattactccccttccgccctccaaaacaagctcctcaagtgggatgacaag
gattccaaaccctcttcttctgatcctcctgctcccccccctcctcctcctcctacttcc
aaggacgacgtctccaagaggaactgcaaccactgcaagtctctctgcagcattgcctgc
tttgtgtgtgataagtacgacatgactctatgtgctaggtgctatgttcgtggtaactat
caagttggtgtgagttcttcagatttcaggagggttgagatcaatgaagattccaagagt
gattggttggataaagatactctgcatcttctagaagcccttttgcatcacggcgatgac
tggaggaaggttgcacagcatgttggtagaagtgagaaggattgtgtctctcatttcatt
aagcttcctttcggcgaagaatttgttgaccgcgagtgttttcaaagcatggatcctagg
catgctgattgtggacccgacacccctgccaccacctcatcctccaccaaaagaatgcgt
ctcactcctcttgcagatgcaagcaacccaattatggctcaggctgcctttttgtcggct
ttggcaggtgtggaggttgcagaaaatgctgcctgtgcagctgtcacaatgctttctcag
gttgattacagatcaagtggaggggctcgtggacctcaagacactaatacaagatggaat
aaagtggatgctgcatccaacggaaacacgaacctaaatacagcagcagaaggagcttgg
ttagatgcaaattcacaacttgagaaggaagaacttgatgtcgagagagccatttctggg
attactgaagtgcagatgaaagagattcaagataaaattgttcattttgaggcgctagat
ttgcagatggagaaagagtggcgacaattggagcaaatgaagaacatgctctttgttgat
caattaacttttttgtttcataaaagttcagcgcaaaaaactggatga
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