KEGG   Ziziphus jujuba (Chinese jujube): 107419873
Entry
107419873         CDS       T04794                                 
Name
(RefSeq) protein RRC1
  KO
K12842  U2-associated protein SR140
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107419873
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zju03041]
    107419873
Spliceosome [BR:zju03041]
 Complex A
  U2 snRNP components
   U2 related factors
    107419873
 Complex B
    107419873
SSDB
Motif
Pfam: Surp RRM_1 CID cwf21 RRM_7 CTK3 SAP
Other DBs
NCBI-GeneID: 107419873
NCBI-ProteinID: XP_048331356
UniProt: A0ABM3IM00
LinkDB
Position
5:complement(join(7189138..7189445,7190110..7190276,7190659..7191464,7191572..7191796,7191982..7192119,7192235..7192319,7192451..7192509,7192691..7192912,7193002..7193073,7193276..7193388,7193849..7194014,7194144..7194263,7194621..7194773,7194870..7194930,7196627..7196672,7196850..7196985,7197065..7197139))
AA seq 983 aa
MSSFSITRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDNAPGSKAFVRGGLIN
PNERLKTDSDGEKSKDGVSVPKKGSRYVPSFIPPPLASKGKESEKKKEEEKPREREKGKS
RNIDHFMEELKHEQEMRERRNQEREHWRDGRHNENTAPSSRFDELPDDFDPSGKLPGSFD
DGDPQTTNLYVGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMN
RADGQAAKDEMQGVVVYEYELKIGWGKSVALPSQALPAPPPGHMAIRSKEGATVILSGPS
GPPVTSVPNQNSELVLTPNVPDITVVPPEDDHLRHVIDTMALYVLDGGCAFEQAIMERGR
GNPLFNFLFELGSKEHTYYVWRLYSFAQGDTLQRWRTEPFIMITGSGRWIPPPLPTVKSP
EHEKESGTTYAAGRSRRVEPERTLTDSQRDEFEDMLRALTLERSQIKEAMGFALDNADAA
GEIVEVLTESLTLKETPIPTKVARLMLVSDVLHNSSAPVKNASAYRTKFEATLPDVMESF
NDLYRSITGRITAEALKERVLKVLQVWSDWFLFSDAYVNGLRATFLRSGNSGVVPFHSIC
GDAPEIEKKTSSEDTGDAGNKMNQDAALAMGKGAATQELMNLPLTELERRCRHNGLSLVG
GREMMVARLLSLEEAEKLRGYELDDDLKYGQTHSTSVRYSSSRREMNNESEPGGLSGWNR
YVEDELESQGKGSLPLAQILPIPQPELKAFTKKEKNDPILPASKWAREDDDSDDEQKRSA
RGLGLSYSSSGSENAGDGPSKAEEMEFATDSSILAQHDSGMSEEQRQKLRRLEATLIEYR
ESLEERGIKNPEEIERKVAIHRKRLESEYGLSDSNEDASGSRKSSERRDRHEAHDTSRKR
HRSPSRNESPQRKSSNRDREREHDSDRERERHRDRDRERGHDFETERGRERDREREKSGS
RERDDHERDKGRERDRDRRRRAK
NT seq 2952 nt   +upstreamnt  +downstreamnt
atgagctctttctctattacacggaaaaagacacccttccaaaagcatagagaggaagag
gaggcaaagaaaaagagagctgaggatgaaacagcacgattgtacgcggagtttgtggag
tcttttcaaggggataatgcacctgggtcaaaagcttttgttcgaggaggattgattaat
cctaatgagagattgaagacagattctgacggtgaaaagtccaaagatggggtatctgtt
ccaaagaagggaagtaggtatgttccatctttcataccgcctcctctggcatccaagggg
aaagaatctgagaaaaaaaaggaggaggagaagccaagagagagagaaaaagggaagtct
cgaaacatagatcatttcatggaggagctgaagcatgagcaagagatgagggaaaggcga
aatcaagaacgtgaacattggcgtgatgggcgccacaatgaaaatactgcaccatctagt
cgttttgatgaactacctgatgactttgatccaagtggaaagcttcctggatcatttgat
gatggtgatccacaaactactaatctatatgttggaaatctctcaccacaggttgatgaa
aattttcttttgcgaacatttggaagatttgggcctattgctagtgtgaagataatgtgg
cctaggacagaagaggagcgaagacgccaaagaaattgtggctttgtagcttttatgaat
agagctgatgggcaggctgcaaaggatgaaatgcaaggggtggttgtttatgaatatgag
ttgaagattggatggggtaagtctgttgctcttccatcacaagcactacctgctcctcca
ccaggacatatggccatcaggagtaaggagggtgccactgtaatcctgtctggtccatca
ggtccacctgttacgtctgttccaaatcagaattctgaattggttctaactccaaatgtt
cctgatattacggttgtgccacctgaggatgatcacctccgtcacgtgattgatacaatg
gctttatatgttttggatggaggatgcgcctttgaacaagcaattatggagagaggtaga
ggcaatcctcttttcaactttttgtttgagcttggctcaaaagagcatacctactatgtc
tggaggctttattcatttgctcagggtgatacactgcaaaggtggagaacagaacctttc
attatgataactggtagtggaagatggataccacctcctctgccaacagtgaaaagccca
gagcatgaaaaagagtctggcacaacatatgctgcaggaagaagcaggcgtgtagagcca
gaaagaactctaactgattcacagagggatgagtttgaggatatgttgcgtgcattaaca
ttagagaggagtcagataaaggaagctatgggatttgcattggataatgctgatgcagct
ggagagatagtagaagttctaacagaatcattgacacttaaggagacccctatcccaact
aaagttgcaagacttatgcttgtctctgatgtacttcacaacagtagtgctcctgtaaag
aatgcatctgcatatcgtacaaaatttgaggcaacgttaccggacgtaatggagagtttt
aatgatttgtatcgaagcattactggaaggatcactgctgaagccctgaaggaacgagtg
ctgaaggtattgcaagtatggtcagactggtttctgttttctgatgcatatgtgaatgga
ttacgagctacctttcttcgatctgggaactcgggtgtggttccttttcactcaatatgt
ggtgatgcaccggaaatagaaaaaaagaccagttctgaggatacaggtgatgcaggtaat
aagatgaaccaagatgctgctttagcaatgggaaaaggtgcagcaacacaggagttgatg
aatcttccccttactgagctggaaagacgttgcagacataatgggttgtctctagttggt
ggtcgggaaatgatggttgcacgattactgagtctggaagaggcagaaaaactgaggggc
tatgagttagatgatgacttgaaatatggtcaaactcattcaacttcagtgagatattcc
agtagcaggagagaaatgaacaatgaatcagagcctgggggtttgtctggatggaatcgt
tatgtggaggacgagttggagtctcaagggaaagggtctttacctttggcgcagatcctt
cccataccacagcctgaactaaaagcgttcacaaagaaagagaaaaatgatcctattttg
ccagcttctaaatgggctagagaggatgatgatagcgatgatgaacaaaagagaagtgct
aggggtcttggtttaagctactcatcatctggtagcgaaaatgctggtgatggtcctagt
aaggctgaagagatggagtttgcaactgattcaagcattctggcacagcatgacagtgga
atgtctgaggaacagaggcaaaagttgagacgtcttgaagctactttgattgaatatcgt
gaatctcttgaggagcgaggtattaaaaatcccgaagagattgagaggaaagtagcaatt
catcgtaaacggcttgaatctgagtatgggttatcagattctaatgaagatgcttctggg
agtaggaaatcttcagagaggagggacagacatgaagcccatgatacatcaagaaaaagg
caccgtagccctagccggaatgaaagccctcaacgaaaatcatcaaaccgagatagagag
agagaacatgattcggacagggagcgagaaagacatagggatagggacagagagagagga
catgattttgaaactgaaaggggcagggagcgggatcgggaacgtgaaaaaagtggaagt
agagaaagggatgatcatgagagggacaaaggcagagaaagagacagagatagaagacgg
agggcaaaatga

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