KEGG   Ziziphus jujuba (Chinese jujube): 107420115
Entry
107420115         CDS       T04794                                 
Name
(RefSeq) endoribonuclease Dicer homolog 3 isoform X1
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:zju00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zju03036]
    107420115
Chromosome and associated proteins [BR:zju03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    107420115
   microRNA pathway
    RISC loading complex
     107420115
SSDB
Motif
Pfam: Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer DEAD ResIII Helicase_C PAZ SNF2-rel_dom SWI2_SNF2 DND1_DSRM AAA_22
Other DBs
NCBI-GeneID: 107420115
NCBI-ProteinID: XP_060673705
UniProt: A0A6P6GAT9
LinkDB
Position
5:join(6631258..6631367,6631462..6631642,6631792..6631905,6632393..6632527,6632672..6632741,6633198..6633262,6633350..6633481,6633633..6633782,6634398..6634527,6635207..6635312,6635398..6635587,6635677..6635837,6635959..6636177,6636276..6636541,6636803..6637074,6637175..6637707,6637786..6637880,6639125..6639348,6639434..6639643,6639817..6640293,6640799..6641071,6641430..6641756,6642334..6642574,6643166..6643277,6643398..6643605)
AA seq 1666 aa
MNSSEAEEAQIPDDDPLHSQQQQQQSSTIPKPFSLRRYQSEVYEAARRRNTIAVLETGAG
KTMIAIMLIKEIGEAIKSTGSKSIIIFLAPTVNLVNQQFEVIKIHTGFEVEEYYGAKGVD
EWNKKRWEKEVNEHDVLVMTPRILYNALLSAFLRLETVSLMVIDECHRASANHDYAKIMK
EFYHKSSSKPKIFGMTASPILRKGVSSKTDCEDQISELESILDSQIYTIEDKTEMELYVP
SAKVTCRFYDQLRCSFLDLKEKMEASWSKFDASLLNMQGLVNEYRDADDRIKTLKKRLSS
DHSKISYCLDDLGLIGAYEAVKLCLENSTNTQEEREINSESYFQCKCFLEELLHLVGESL
PHGCDDLLDFESDLLKAVDLGYITPKLRELVELFQSFGEARQLLCLIFVDRIVSAKVIER
IVKKITYLSHFTVSYLTGSNSVDALAPKMQKETLESFRFGKVNLLFSTDVVEEGIHVPNC
SYVIRFDLPKTVRSYVQSRGRARQSNSQFVVMLERGNMKQRDQLFDVIRSECSMIDTTVN
RDPDAHSLKTWTFGGTDGYLVHATGASVTADSSISLIQRYCEKLPTAKCFASKPTFQFSC
LEGFYECKLTLPPNSAFQTLVGPVSRSSNLSKQLVCLEACKKLHQMGALDNNLLPLVEEP
SKNNPTVKSKEATSGAGTTKRKELHGTTHIRALSGTWGEKVDSATFHAYKFDFSCSIISE
VYSGFVLLIESNLDDDVGNIELELYLVSKSVKSSVSSCGKVCLDAEQMKKAKCFQEFFFN
GLFGRLFHGSKSSGNREFLLQKETTTLWSTLYMYLLLPLEGLNDSGHEPWRIDWTGIASC
ISVVKLLKNNSLLGSGHCNYNGGDLLPSRTDLSETESKEANVICFANSSVDISNLNNMVV
LAIHTGKLYSIVEAVSNTSAESPFDGNTDAVPSEYTTFNEYFHKKYQIVLKYPNQPLLRL
KQSHNPHNLLVNFSDEGSDGGKTSKSRLVKPQMHVHMPPELLARIDVPRAVLKSCYLLPS
LMHRLESLMLASQLRGSIGCHPSSFQISSSLILEALTTLRCCENFSMERLELLGDSVLKY
VMSCHLFLKYPKKHEGQLSDLRSLAVCNSNLHKLGTDRQLQGYIRDSAFDPRRWTAPGQR
PLRPVPCKCGVDTSEVPLSSEFHSEDPKIVVGKCCDKGHRWMGSKTVADCVEALVGAYYV
AGGLAAAIHMMKWLGFDAELELSLVVEAINAASLWSYIPKADDIASLESKIGYEFLTKGL
LQEAITHPSVEEQGVCYCYERLEFLGDSVLDLLITWYLYQSYIDIDPGELTDLRSASVNN
ENFAQVAVRRNLQLHLQHCSGLLLSQITAYVGSFSEPHNTNGSIQGTKGPKALGDMVESI
AGAILIDTKLDLDKVWEIFEPLLSPIVTPDKLELPPLRELIELCDSLGYCMKEKCIKKGE
MVHAELTVQLKDVLLVGTGYDQNRKAAKGAAARCLLKKMENKGVSYAQLSKKRKQGRDHV
VDSSSEDVKNNPYTKITDDLVAMIHKKQKTSEIQSQDVSRVSSSTGVFSMEASDPNTDTP
VIGAINMKKGGPRNSLFDLCKKLQWPRPTFDTIETKSRTPIELGEGCERRMGFNSFVSNI
ILTIPNFGNIECSGDARADKKSSLDSAAVAMLYELQRLGKLVIARS
NT seq 5001 nt   +upstreamnt  +downstreamnt
atgaattcctcggaggcagaggaggctcaaattcctgatgatgatcctcttcattctcaa
caacaacaacaacagtcttccaccattcctaagcccttcagtctcagaaggtatcagtca
gaggtatatgaggctgcaaggaggaggaacaccattgctgtattggagacaggtgctggg
aagactatgatcgctattatgctcatcaaagaaattggtgaagctatcaaatccaccggc
tctaaaagcataatcatcttcttggctcctactgttaatctcgttaaccagcaatttgag
gttatcaaaatacatactggttttgaagtcgaagaatattatggagccaagggagttgac
gagtggaataagaagcgttgggaaaaggaagtaaatgaacatgatgtcctggttatgaca
ccacggattctttataatgccttgttaagcgcattcttgagactagaaacagtatccttg
atggttattgatgaatgccatcgagctagtgctaaccatgattatgcaaaaataatgaag
gaattttatcacaaatctagcagcaagccaaagatttttggaatgacagcttcacctatt
cttagaaaaggtgtctcatccaaaacggattgcgaggaccaaatatcagaacttgaaagc
atcttggactcacagatttatactattgaagacaagacagagatggaattatatgtccct
tctgcgaaagtgacttgtagattttatgaccaattacgctgctcatttttagatttgaaa
gaaaagatggaagcctcatggtccaagtttgatgcgtcattgttaaatatgcaagggttg
gtaaatgagtacagggatgctgatgatagaattaagacattgaagaaaaggctgtccagt
gatcattcaaagatatcatattgtcttgacgatcttggtcttataggtgcttatgaggct
gtaaagctatgtcttgagaattccactaatacccaagaggagcgtgaaattaacagtgag
agttattttcagtgtaaatgttttctggaggagttgttacatctagttggggaatcacta
ccacatggttgtgatgatcttttggattttgagtctgatcttttgaaggcagtagattta
ggctatataactcctaaattacgtgaacttgttgaacttttccagtcttttggggaagct
agacaactactatgcctcatttttgtagataggattgtctcagctaaagtaattgaaaga
attgttaagaaaattacgtatttatctcatttcacagtttcatatctgactggaagcaac
tcggttgatgcactggcaccaaaaatgcaaaaggagactctggaatcatttcgctttgga
aaggtcaatctattattttctactgacgtagttgaggagggaattcatgtgccaaattgc
tcctatgtgatacgttttgacctacccaagacagtccgcagttatgtccagtccagggga
cgagcacggcaaagcaactctcagtttgtcgttatgttggagaggggaaacatgaaacaa
agggatcaactatttgatgtcattaggagcgagtgttcaatgatagatacaactgtcaat
agagatcctgatgcacatagtttaaaaacatggactttcggaggaacagatgggtatttg
gtgcatgccactggtgcatcagttactgctgattctagcatcagtctcatacaacgatat
tgtgaaaagctcccaaccgctaagtgttttgcttcaaagccaacttttcagttctcatgt
cttgaaggcttttacgagtgcaagctaacgttacctcctaattctgctttccaaacatta
gttggtcctgtaagtaggagttctaatttatcgaagcagcttgtttgcttggaagcatgt
aaaaagctacatcagatgggtgctctggataataatcttcttccactagttgaggagcct
tcaaaaaataatccgactgtaaaaagcaaagaagcaacttccggtgcaggaacaacaaaa
aggaaggaactacacggtacaactcacatccgtgcattatctggaacttggggtgaaaaa
gtggatagtgccacttttcacgcttataagtttgacttctcctgtagtattattagtgag
gtttattctggatttgttcttctgattgagtcaaatcttgatgatgatgtgggaaatatt
gaattggaactctatttggtttcaaagtcagttaagtcttctgtttcttcatgtggaaag
gtgtgtctggatgcagagcagatgaaaaaagcaaaatgctttcaggaatttttctttaat
ggattatttggaaggttgtttcatggatccaagtcatcgggaaatagagagtttttactt
cagaaagaaacaacaacactatggagcacattgtacatgtatttgcttctgcctcttgaa
ggtttgaatgattcaggtcatgaaccttggagaatagattggacagggattgcttcttgc
atttctgtggttaaattgttgaagaacaattctttgttgggcagtggacattgtaattat
aacggaggggatttattacctagtagaactgacttatctgagactgaatctaaagaagca
aatgtaatatgctttgctaatagttctgttgatatatcaaatcttaacaatatggtagta
ttggctattcatacgggaaaattatactctattgttgaagctgtgagcaacacatcggct
gagagcccttttgatggtaatactgatgctgtcccatcagaatacactacctttaatgag
tattttcacaaaaagtatcagattgtactaaagtatccgaatcagcctttgttgcggtta
aagcaaagtcataatcctcataatcttctagtgaacttctctgatgaaggttctgatggt
ggtaagacatcaaaatctcgccttgttaagccacaaatgcatgttcacatgccacctgaa
cttttagcaaggattgatgtcccaagagctgttctaaaatcatgttatttactaccatca
ttgatgcatcgtttggaatctctgatgttagcaagccaacttagaggatcgattggctgt
catccaagcagctttcagatatcaagctcattgattctagaagcacttacaacacttaga
tgttgtgaaaatttttctatggagcgcttggaattgcttggtgattcagtcttgaagtat
gttatgagttgccacctttttcttaaatatcccaaaaaacatgaaggacagttatctgat
cttcgttcattggccgtttgtaactcaaaccttcataaattaggaactgatcgtcaattg
cagggctacattcgtgatagtgcttttgatccacgtcgttggactgctcctggacagcgt
cctttgcgcccggtgccttgtaaatgtggagtggatacttcggaagttcctctttctagt
gagttccacagtgaagatccaaaaattgtggttggaaaatgctgtgataaaggtcacagg
tggatgggttcaaaaacagtagctgattgtgttgaagcccttgtaggggcatattatgtt
gctggtggactggctgctgcaattcatatgatgaagtggctgggttttgacgctgagctt
gagctctctttagttgttgaagcaatcaatgctgcatctctttggtcttacatcccaaaa
gccgatgacattgcatccctggagtcaaagattgggtatgaatttttgaccaagggtctc
ttacaggaagccataacgcatccatctgtggaagaacagggtgtttgttactgctatgag
aggctcgaatttcttggtgattcagttttggatctgcttattacatggtacctctatcag
agctacatagatattgatccaggcgagttgactgacttacgttcagcttctgttaataat
gaaaactttgctcaagttgctgtgagacgaaaccttcaactgcatctgcaacattgctcc
gggttactattgagtcaaataactgcatatgtgggttctttttctgaacctcacaacaca
aatggatcaattcaaggcacaaaaggtcccaaggcccttggagacatggtggaaagtatt
gcaggggcaatactaattgacactaagcttgatctggataaagtgtgggaaatatttgaa
ccgctattatctccaattgtgacccctgataaacttgaattgcccccattgcgtgaattg
attgaattatgtgactctcttggatattgcatgaaagaaaaatgcataaagaaaggtgaa
atggtgcatgcggagcttactgtacagctcaaagatgtactgttagttgggacgggatat
gaccaaaacagaaaagctgcaaaaggagcagcagcccgatgtttattgaagaaaatggag
aataaaggtgtctcgtatgctcaactttccaagaagagaaagcagggtagagatcatgtt
gttgattcatcttctgaagatgtgaaaaataacccatacaccaaaataactgatgatttg
gtggcaatgatccacaaaaagcaaaagacatctgaaattcagtcacaggatgtgtcaaga
gtttcatcttcaactggtgtcttttcaatggaagccagtgatcctaacactgacacccca
gttattggagcaatcaacatgaagaaaggaggtcctcgaaactcactttttgacctatgt
aagaaactacaatggccaaggcctaccttcgatacaatagaaactaaatcaagaacgcca
attgaacttggtgaaggctgcgaaagaagaatgggattcaacagttttgtatcaaatatt
atcttgaccatacccaactttggcaatattgaatgcagtggtgatgctagggctgataag
aagagctcactagactctgcagcagttgcaatgctttatgagctccaacgtttaggcaaa
ctcgtcattgccaggtcgtag

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