KEGG   Ziziphus jujuba (Chinese jujube): 107420151
Entry
107420151         CDS       T04794                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03015  mRNA surveillance pathway
zju04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107420151
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    107420151
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:zju01009]
    107420151
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zju03019]
    107420151
   03036 Chromosome and associated proteins [BR:zju03036]
    107420151
Protein phosphatases and associated proteins [BR:zju01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     107420151
Messenger RNA biogenesis [BR:zju03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     107420151
Chromosome and associated proteins [BR:zju03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     107420151
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_WDR3_1st WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd ComGF
Other DBs
NCBI-GeneID: 107420151
NCBI-ProteinID: XP_015884526
UniProt: A0A6P3ZW23
LinkDB
Position
5:complement(join(5898353..5898489,5898825..5898892,5899026..5899103,5899274..5899365,5899472..5899540,5899804..5899927,5900063..5900186,5900320..5900438,5900846..5900937,5901088..5901294,5901617..5901736,5901849..5901947,5902061..5902164,5903489..5903591))
AA seq 511 aa
MNGGGEGVSASAAPLEWKFSQVFGERTAGEEVQEVDIISAIEFDRTGDHLATGDRGGRVV
LFERTDNKEHGGHRRDLERTDYSIGRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRW
CQTANGALFLLSTNDKTIKFWKVQEKKVKKVCDMNVDPSKAVGNGPVVGCTSTSSRPYLA
NGGCKERPISYLSNDVSFPPGGFSSLHLPVVVTSHETSLTARCRRVYAHAHDYHINSISN
NSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTQCNMLAYS
SSKGSIRLIDMRQSALCDTHSKLFEEQEVVGSKSFFTEIIASISDIKFAKDGRHILSRDY
MTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLHVATGSYSNL
FRVFGCSEGSTEATTLEASKTPMRRQVQNPSRPSRPMGSLPRVLRRGVDTSGADANGNAF
DFTTKLLHLAWHPTDNSLACAASNSLYMYYA
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgaacggcggcggggagggggtatcggcttcggcggcgccgctggagtggaaattctcg
caggtgttcggagaacgtacggccggcgaagaagttcaggaagttgatatcatatctgct
attgaatttgatagaactggagatcatcttgcaactggagatcgtggaggtcgagtggtt
ttgtttgaaagaactgataataaagaacatggtggacatcggagagatctagagaggaca
gattattcgatcggtaggcatcctgagttccgttacaaaactgagttccagagtcatgaa
cctgagtttgactatcttaaaagcctggagattgaggagaaaattaacaagattagatgg
tgccaaacagctaatggtgctctgtttcttctctcaaccaatgacaaaacaatcaaattt
tggaaggtccaagagaagaaggttaagaaagtttgtgatatgaatgtggatccttcaaaa
gctgtgggaaacggtcctgttgttggttgtacatcgacgagctccagaccatatcttgca
aatggaggatgtaaagaaagacctatcagttatctgagcaatgatgtttcattcccaccc
gggggtttctcatccctgcatttgcctgtggtagtgaccagccatgagacaagtcttacg
gctagatgtagaagagtatatgcccatgctcatgactatcatatcaattccatttcgaat
aacagtgatggtgaaacttttatatcagctgatgacctccgaattaatctttggaacctt
gagattagcaatcaaagttttaatattgttgatgtgaagcctgcaaatatggaagatcta
actgaggtgataacttcagcggaatttcaccctactcaatgtaacatgttagcatatagt
agctccaagggttcaattcgtctcattgatatgcgtcaatcagctttgtgtgatacccat
agcaaactatttgaggaacaggaagtggttggttctaagtccttttttactgagataata
gcctcaatttcagatattaagtttgcgaaggatggaaggcatattcttagtcgtgattac
atgactcttaagctgtgggacattaatatggattctggcccagtcgcaacttttcaggtt
catgaatatttaagacccaagctgtgtgatctatacgaaaatgattctatcttcgataaa
tttgagtgctgtctaagtggagatggactccatgtggcaacaggttcctacagcaatctg
tttcgtgtgtttggttgttctgaaggcagtacagaagcaacaactttagaagccagcaaa
acccccatgaggagacaagtccaaaacccatcaaggccttctagacctatgggctccctt
cctcgtgttttaaggcgaggtgtggatacctctggagctgacgcaaatggaaatgctttt
gattttacgacaaagttgctacatcttgcatggcatccaactgataactcacttgcctgt
gctgcatcaaacagcctttatatgtattatgcgtaa

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