Ziziphus jujuba (Chinese jujube): 107420158
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Entry
107420158 CDS
T04794
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase NSUN5 isoform X1
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zju03009
]
107420158
Enzymes [BR:
zju01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
107420158
Ribosome biogenesis [BR:
zju03009
]
Eukaryotic type
Other ribosome biogenesis factors
107420158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
Ubie_methyltran
Methyltransf_25
Methyltransf_31
PCMT
RrnaAD
FtsJ
Methyltransf_4
RsmF-B_ferredox
Cons_hypoth95
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-GeneID:
107420158
NCBI-ProteinID:
XP_015884536
UniProt:
A0A6P4AFM6
LinkDB
All DBs
Position
5:join(6340324..6340543,6340653..6340711,6340869..6340919,6341012..6341147,6341427..6341512,6341896..6341994,6342268..6342321,6342557..6342701,6342889..6342950,6343130..6343217,6343454..6343537,6343747..6343908,6344003..6344229)
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AA seq
490 aa
AA seq
DB search
MSESGATEKSEKRRRMNAERSAYFARREAAKVLRVVLLGDARRQAVGSIKSLVYSPSVKN
KKGTFALVCQTLKHLLIIKEVLEAASVLNSKWKKQEELIYVITYDILFGQAVLSTGDAEK
FLWGRRDALKSALASLLKRKQVKSVQELVSLYETPGVSKPRYVRVNTLKVDVESAVLELE
KQYMVQKDDLVPDLLVLPPGSDLHDHHLVMNGSIFMQGKASSMVAAALSPKPGWEVLDAC
SAPGNKTVQLAAIMRGKGKILACELNKERVKRLKDTIRLSGASNIQVLHGDFLKLSSVDP
SYSKVRAILLDPSCSGSGTASVRLDHLLPSYASGHSANAADEERLKKLAAFQRKALEHAL
SFPGVQRIVYSTCSVHQIENEDVVQSVLPLAASYGFHLETPFPQWQRRGLPVFDGSENLL
RTDPVEDKEGFFIALFVRKISDTIQDSVIATKKQFMVRPSPSKLFKFWLKVKPNWGKRLS
SRRKRCKTVK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtccggagccactgagaagtcggaaaaacggcgtcgtatgaacgccgagcgg
tctgcgtactttgctaggagagaagctgctaaggtcttgcgagtcgttctgctaggggac
gctcggcgccaagccgtcggctctatcaagtcgctggtctatagtccttctgtaaagaac
aagaagggaaccttcgctctggtctgtcaaaccctcaagcatcttttaattatcaaggag
gtgttagaggctgctagtgtacttaatagcaaatggaagaagcaagaggaattaatctat
gtcatcacgtacgatattctttttgggcaggcagttttatcaactggtgatgcggagaag
tttctatggggtcgaagagatgctttgaagtcagctcttgcatcccttttgaagaggaag
caagtgaagagtgtccaagagttggtatctctctatgaaactcctggtgtttcgaaaccg
cgttatgtacgtgtaaatactctgaaagtagatgtagaatccgccgttcttgaattggaa
aagcaatatatggtgcaaaaggatgatttggttcctgacttattggttcttccaccgggt
agtgatttgcatgatcatcatttagtcatgaatggaagtatctttatgcaaggcaaggca
agttctatggtggcagcagcccttagtcccaaaccaggatgggaggttcttgatgcatgt
tcagctcctgggaacaaaactgttcaacttgccgctatcatgagaggaaagggaaaaatt
ttagcttgtgagctgaataaagaaagggttaaacgtttaaaagatactatcagactctct
ggtgcctctaatatacaagttttgcatggagattttttaaaattaagctcagttgaccct
tcatattccaaggtccgagctattctattagatccttcatgttctggatctgggactgct
tctgtgagattagaccatttgcttccatcttatgcttcaggtcattcagccaatgctgct
gatgaagaaagattgaagaagcttgcagctttccagagaaaggctctagaacatgctttg
tcttttccaggagtacagaggatagtctacagcacctgctccgtacaccaaatcgagaac
gaggacgtggtccaatcggttttacctctcgctgcatcctatgggtttcacttggaaact
ccattcccccagtggcaacgccgtggtcttccagtttttgatggctctgaaaatttgctg
cgcaccgatccggttgaggacaaagaaggattctttattgctctatttgtccggaagatc
tcagacactatccaagacagcgtaatcgccaccaagaaacagtttatggttcgcccttcc
ccttctaaattgtttaaattttggttaaaagtgaagccaaattgggggaaaagattgtct
tcgagacgcaagagatgtaagacagtaaagtag
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