Ziziphus jujuba (Chinese jujube): 107420849
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Entry
107420849 CDS
T04794
Name
(RefSeq) cryptochrome-1
KO
K12118
cryptochrome 1
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
107420849
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
107420849
NCBI-ProteinID:
XP_015885397
UniProt:
A0A6P3ZYT0
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All DBs
Position
5:complement(join(11434113..11434116,11434417..11435210,11435935..11436641,11437566..11437784,11438468..11438780))
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AA seq
678 aa
AA seq
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MSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVVALFVWAPEEEGHYYPGRVSRWWLKQSL
AHLDSSLRSLGTSLITKRSTDSVSSLLEVVKSTGATQLFFNHLYDPLSLVRDHRAKEFLT
AQGIAVRSFNADLLYEPWDVNDAYGRPFTTFAAFWERCLSMPFDPEAPLLPPKRIFSGDV
SRCSSDPLAFEDESEKGSNALLARAWSPGWSSADKALTTFINGPLIEYSKNRRKADSATT
SFLSPHLHFGEVSVRKVFHLVRIKQVLWANEGNKAGEESVNLFLKSIGLREYSRYLSFNH
PYSHERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFEGYKFD
PNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPLVEIDAAKARLQEA
LTEMWQLEASSRAAIENGTEEGLGDSSESTLIAFPQDIQMEENHELPRNNPPTTRCYEDQ
MVPSMTSSLVRVEEETSMGLRVLAEESRAEVPADAVVNQEPRRDLLNQGTMQTIHRNTLP
HHNTPGLQHAVEDSTAESSSSTRREWDGGIVPVWSPSPSSYSEQFVGDENGIGTSSSYLQ
RHPQSHQIMNCRQLSQTG
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggtgggtgtagcatagtatggttcaggagagatctgagggtagaagataac
ccagcccttgcagctggagttagagcaggtgctgtggttgctctctttgtatgggcacct
gaagaagaaggccattactatcctggaagggtttcaaggtggtggctcaaacaaagtttg
gctcatcttgattcctctttgagaagtcttggtacttctctcatcaccaagagatctact
gacagtgtttcttctctacttgaggttgttaagtccactggtgctactcaactattcttc
aaccacttatatgaccccttgtcacttgttagagatcatcgggcaaaggagtttttaact
gctcaagggatagctgtacgttcctttaatgcggatctgctctacgaaccatgggatgtc
aatgatgcctacggtcgcccattcacaacctttgcagctttctgggaaagatgccttagc
atgccatttgacccggaggcaccgcttcttccacctaagagaatattttcaggtgatgta
tcaaggtgctcctctgatccattagcgtttgaagatgaatcagagaagggaagcaatgca
cttcttgctcgagcatggtctcctgggtggagcagtgctgataaggccttgacaacgttc
attaacggaccgctaattgaatattcaaaaaatcgcaggaaggctgatagtgccacaaca
tcatttctctctccacatttgcattttggagaggtaagtgtgagaaaagtcttccatctt
gttcgaatcaagcaggttttgtgggccaatgaaggaaacaaggctggtgaagagagtgtg
aacttgtttctaaagtctattggtcttagggaatattcaagatacttgagttttaatcat
ccttacagtcatgaaagaccccttcttgggcatctgaagttctttccttgggttgtgaat
gagggatatttcaaggcttggaggcaaggtagaactggctatcccttggtggatgctggc
atgagagagttgtgggcaactggctggctgcatgaccggatacgagtggtagtttctagt
ttctttgtaaaggttctgcaactaccatggaggtggggaatgaagtatttctgggacaca
ctcttagatgcagatctggagagtgatgctcttggttggcaatatatatctggtactctc
cctgatggtcgtgaatttgaccgcatagataatccacagtttgagggttacaaatttgac
cctaatggagaatatgtccgaaggtggcttcctgaacttgctagactgccaactgaatgg
atacatcacccttggaatgcaccagaatctgtactccaagctgctggtattgaactggga
tcaaactatcctcttccccttgtagaaatagatgctgcaaaagccaggttgcaagaagca
ctgacagagatgtggcagctagaagcatcttcaagggctgcaattgagaatggaacggag
gaaggacttggagactcctctgagtcaaccctaattgcctttcctcaagacattcaaatg
gaagaaaatcatgaattgccaaggaacaatcctcctactacacggtgctacgaggatcag
atggttccaagcatgacttcttctttggtaagagttgaagaggaaacttctatgggtctt
cgagttttggcagaagagagcagggcagaagtgccagcagatgcagttgtgaaccaagaa
ccaagaagagacctattaaaccaagggaccatgcagactattcatagaaacactctgcca
catcacaatacacctggcctgcaacatgctgttgaagattccaccgcagaatcttccagt
agtactaggagagaatgggatggaggtatcgttccagtttggtctccttcaccttctagt
tactcagagcagtttgtgggtgatgaaaatggcattggaacaagttcatcttatttgcag
agacatcctcagtctcatcaaataatgaattgcaggcagttatctcaaactgggtaa
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