KEGG   Ziziphus jujuba (Chinese jujube): 107421117
Entry
107421117         CDS       T04794                                 
Name
(RefSeq) uncharacterized protein LOC107421117 isoform X3
  KO
K10728  topoisomerase (DNA) II binding protein 1
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    107421117
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:zju03032]
    107421117
   03400 DNA repair and recombination proteins [BR:zju03400]
    107421117
DNA replication proteins [BR:zju03032]
 Eukaryotic type
  DNA Replication Initiation Factors
   Other initiation factors
    107421117
DNA repair and recombination proteins [BR:zju03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-B complex
     107421117
SSDB
Motif
Pfam: PTCB-BRCT BRCT BRCT_2 LIG3_BRCT BRCT_3 TopBP1_BRCT0 ECT2_BRCT0
Other DBs
NCBI-GeneID: 107421117
NCBI-ProteinID: XP_015885769
UniProt: A0A6P4AJ02
LinkDB
Position
5:complement(join(14449912..14449989,14450284..14450368,14451400..14451485,14451622..14451666,14451748..14452167,14452257..14452547,14453473..14453640,14454826..14455184,14455387..14455529,14455694..14456201,14456346..14456439,14457155..14457246,14457323..14457467,14458107..14458214,14458567..14458688,14459810..14459852,14459956..14460135))
AA seq 988 aa
MLKTNAFKGANVFMSRNLVPPEIFDALHDALKQNGAEVFLCCDPSRNGPNDFHIISSFDH
EKFEDLRAKGCNLLGPQCVFSCAKEHKVLPKQWFTCCLAMDGVKVLASGFEVDEKAKIEK
LVTAMGGVLHTRASSDVNFVIVKNVLAAKYKWAVQILKKPIVTINWLYQCWNEHRIVPQE
SFRVLPFSGLTICVTRILADERKEIEKLIIQNGGKYSAELTKKCTHLISEAPEGDKYKVA
RRWGHIRVVTRKWFDQSLARRACLNEESYPVPGSSESSNKIARGSVKMQLSSQGKGIGNL
QSTSSSVAGDPNLPGGSCGGFVDPDMEATLSQNIGSVFSVTPVTEKEEDSEVPTVQPKVE
KNLTNLDDCVANDSQSEDSDLYLSECRILLVGFEASEMRRLVNMVRRGGGSRYILFNDKL
THIVVGTPSENEKKEVRGLAAMGVIHVVRTTWLEDCDREKKEIPVFQRHIASDLLLPKGA
LTGMTSINQVRISAAHLSVPSNRLPGNTSVGTGMPSSSDKIREEKPQVNMKGDSLMETVT
RSSQQSQLSVGNIKSKGQIDARNKARPNIHHDSVQNGKLSSVFKGKIFCFSNSFPEDRKA
EIIQWVNQGGGEVVDDHLKQSVHFTIECHGVVPKSTDALQITYVSSHWIRSCLEDGRLLD
VSSHILYSPLPCRIPLPGFESFRFCVSQYEEKDRLLLRNLCFVLGAKFVEKLTKKVTHLL
CKFVNGPKYEAACKWGIHSITSEWIFECVKQNRVVPLDSFCPKEVSAQDQEAGLCTFSQF
PTQAVRMISRDTPSQIPSQLEDMRNSPTESIGCKTGSLREEAEQLSSFSKKARVLENVGK
KGLLSSETHLSLPICNMNSAEDNMAKDTDEVSHVVPDVAAAIEDLLEQTSKIQDPNSPGR
TECSKNLFSSSCSTLGQDHSDTHTVIGLSKHWLNRTGRKDDIYKSSGDGNGYDGFSETQT
DSQIVGYEEDLSGRQMLIDRVRTRSSMT
NT seq 2967 nt   +upstreamnt  +downstreamnt
atgttgaagacgaatgcgttcaagggagccaatgtcttcatgtctcggaacctcgtgccg
cccgaaatcttcgacgctcttcacgacgctctcaagcaaaatggcgccgaggtcttcctc
tgctgcgatccttctcgcaacggccccaacgatttccacattatctcttccttcgatcat
gagaagtttgaggatcttagagccaagggttgtaatttgctcggtcctcaatgtgtgttt
tcctgtgcaaaagagcataaggtgctgcccaaacaatggtttacttgttgccttgctatg
gatggtgtcaaggttcttgcttctggttttgaggtggatgaaaaggctaagatagaaaag
ttagtaacagcaatggggggagtgttgcataccagagcatcttcagatgttaactttgtc
attgtaaagaatgttttggctgcaaaatacaagtgggcagtacaaatcttgaagaaacca
attgtaaccatcaattggttataccagtgttggaatgaacatcgaattgttcctcaagaa
tcattcagagttctccctttttctggattgacaatttgtgttaccagaattctagcagat
gagaggaaggagatagaaaagcttattatacaaaatggtgggaaatattctgctgaactt
accaagaagtgtactcacctaatttctgaggctcctgaaggtgataaatataaggttgca
cgaagatggggccacattcgtgttgtcactcggaaatggtttgatcaatctcttgctaga
agagcatgtcttaatgaggagtcctatcctgttccgggtagttctgaatcttcaaataaa
attgcaaggggttctgtgaagatgcagcttagtagtcaaggtaaaggtattgggaatttg
cagtctacatcatcatcagtggctggagatccgaatttaccaggaggttcttgtggtgga
tttgtagatccggatatggaagctactctctcacaaaacataggttctgtattttctgtt
acccctgtcactgagaaagaagaggatagtgaagtacctacagtgcagcccaaagttgaa
aagaacctaacaaatcttgatgattgtgttgccaatgattctcaatctgaagatagtgac
ctttacttgtccgagtgcagaattttacttgttggattcgaagcttctgaaatgcgcaga
ttagttaatatggttcgcagaggtggaggctcccggtatattctgtttaatgataaattg
acacacatagtagttggaactccttcagagaatgaaaagaaggaggtaaggggccttgct
gctatgggtgtcattcatgtggtgagaaccacttggcttgaagattgtgatcgtgaaaag
aaagagatccctgtttttcagaggcacattgccagtgatttacttcttcctaaaggagcg
ctgacaggcatgactagtatcaatcaagttagaatatctgctgctcatcttagcgtgcca
tctaatcgattaccagggaatacaagtgttggaactggaatgccatcatcatcagataaa
atcagagaagagaaaccccaagtcaacatgaaaggtgacagcttaatggaaacagtgaca
agatcatctcagcagagtcaactttctgttggaaatattaaaagtaagggtcaaatagat
gctagaaacaaggctcgaccaaatatacatcatgattcagttcagaatgggaagttgtca
agtgtatttaagggcaaaatattttgcttctcaaattcctttcctgaagataggaaagct
gaaatcattcaatgggtaaatcaaggaggaggagaggtagttgatgatcatttaaaacag
agtgtgcatttcactattgagtgtcatggtgttgttccaaaatctacggatgcccttcaa
attacctatgtatcaagtcactggatccgttcttgtttagaggatggacgcttgctggat
gttagtagtcacattctctattctccacttccatgccggattcctttacctggatttgaa
agctttcggttttgtgtttcgcaatatgaagagaaagatagactgttattgagaaattta
tgttttgttcttggagctaaatttgtagaaaaattgaccaagaaggtcacccatctattg
tgcaaatttgtgaatggaccaaaatacgaggctgcttgtaaatgggggatacactcgatt
acatccgagtggatatttgagtgtgtcaagcagaatagggttgttcctctggattcattc
tgtccaaaagaagtcagtgcgcaagaccaagaggcagggttgtgtacattcagtcagttt
cctacacaagctgtcagaatgatatctagagacactccatctcagattccaagtcaatta
gaagacatgagaaactcaccaactgaaagcattggttgcaaaactggcagcctcagggaa
gaggccgaacaattaagttcttttagtaaaaaggcaagggttttggaaaatgttggcaaa
aagggcttactttcttctgagacacatttaagtcttcctatctgcaatatgaattcagct
gaagacaacatggcaaaggatacagatgaagtgtcacatgttgttcctgatgttgctgca
gccattgaggacttgttggagcagacaagcaagattcaggatccaaattcaccagggagg
accgaatgcagtaaaaatcttttctcatctagttgttcaacccttggtcaagaccattca
gatacacacactgtcattgggttatcaaagcactggttaaacaggactgggagaaaagat
gacatctacaagtcttctggagacggaaatggatatgatggttttagtgaaacacagact
gattctcagatcgttggttatgaagaagatttatcaggcagacaaatgcttatagacagg
gttcgaacacggagtagcatgacttga

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