Ziziphus jujuba (Chinese jujube): 107421146
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Entry
107421146 CDS
T04794
Name
(RefSeq) cysteine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
107421146
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zju01007
]
107421146
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zju03016
]
107421146
Enzymes [BR:
zju01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
107421146
Amino acid related enzymes [BR:
zju01007
]
Aminoacyl-tRNA synthetase
Class I (G)
107421146
Transfer RNA biogenesis [BR:
zju03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
107421146
Prokaryotic type
107421146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
CysS_C
DALR_2
tRNA-synt_1f
DUF6825
Motif
Other DBs
NCBI-GeneID:
107421146
NCBI-ProteinID:
XP_048331399
UniProt:
A0ABM3IM31
LinkDB
All DBs
Position
5:join(15674402..15674760,15674901..15674964,15675253..15675414,15676085..15676255,15676802..15677083,15677705..15677830,15678252..15678455,15679028..15679129,15679283..15679519)
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AA seq
568 aa
AA seq
DB search
MGTLLKCYKPLFLIQLSAFPNSARTFRLGTHRFFTFRKANIRCLSSPSSSQPLVKEKIRG
KPENPWPSELWLHNTMSRKKEAFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLYR
YLKHLGYQVCYVRNFTDVDDKIINRANELGEDPISLSRRFCEEFNQDMSYLQCLPPSVEP
RVSDHMPQIKDMIKKIIDNGYAYIVDGDVYFTVDKFPEYGRLSGRKLEDNRAGERVAVDS
RKKNPADFALWKSAKEGEPFWDSPWGPGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVFP
HHENEIAQSCAACEQTNISYWIHNGFVTIDSEKMSKSLGNFFTIRQVIDVYHPLALRLFL
LSTHYRSPVNYSDVQLESASDRIFYIYQTLLDCEDVLSQHDEATRKDSIPPDTVDGINKF
HNVVVASMSDDLRTPDVLAALSDPLKTINDLVHTRKGKKQNLRIESLAALEKTIRNVLSI
LGLMPASYSEILHQLREKALKRAKLTENQVLQKIEERTIARKNKEYEKSDAIRKDLAAVG
ITLMDSPDGTTWRPAVPLALQEQQVTET
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgggcactttgctgaagtgctacaaacccttgttcctaatccaactctccgcatttccc
aactcagctcggacgtttcgactcggaactcaccgtttcttcaccttccgcaaagccaat
atccgctgcctgagttctccgagctcttcacaaccgttggtcaaagagaaaattcgcggc
aaacctgagaatccatggccgtcggagctttggctgcacaacacaatgagcagaaagaag
gaggctttcaaacccaaagtggaaggcaaagtgggtatgtatgtttgcggagtcactgcc
tacgatctcagtcacattggccatgctcgcgtctatgtcactttcgacgttctctataga
tatcttaaacatttggggtaccaagtttgctatgttcgcaatttcaccgatgtcgatgac
aaaataattaatagagcaaatgaattgggagaggatccgatcagtttgagtagacggttt
tgcgaagagttcaatcaagatatgtcctatcttcaatgcctgcctccttctgtggaaccg
cgagtgtcggatcacatgccacaaataaaagacatgatcaagaagattattgataatggg
tatgcctacatagttgatggggatgtatacttcactgtagacaagtttccagaatatggg
cgtctatctgggcggaagttagaagataaccgagctggtgagcgagttgctgttgactca
aggaagaaaaatcctgccgattttgctttatggaagtcagcaaaggagggggaacccttc
tgggacagtccatggggtcctggaagacctggttggcatattgaatgtagtgccatgagt
gcagcttatctgggttactcttttgatatacatggtggaggtatggaccttgtgtttcct
caccatgaaaatgaaattgctcagagctgtgctgcttgcgagcagactaatataagctat
tggatacacaatggatttgtcactattgactcagagaaaatgtccaaatcccttggaaac
ttcttcacaattaggcaggttatagacgtttaccatccattggctttgagacttttcttg
ttgagcacccactatcggtcaccagtcaactattctgatgtacagcttgaaagtgcttca
gaccgtattttctatatctatcagacattacttgattgtgaagatgttctaagccaacat
gatgaggcaactcggaaagattccatcccacctgataccgttgatggcatcaataagttt
cataacgttgttgtggcatcaatgtcggatgatcttcgcactcccgatgttctggctgca
ctatctgatccattaaaaacaattaatgatcttgtacatactcgtaagggaaagaaacaa
aatttacgaatagaatcacttgcagctttggaaaagacaatcaggaatgtgttgagtatt
ttaggactcatgcctgcaagttattccgagatcctacatcaactaagagaaaaagccttg
aagcgtgccaaattaacagaaaatcaagtcttgcaaaaaattgaggaaaggacaatagca
aggaagaataaagaatatgaaaaatcagatgcaatcagaaaagatttagctgctgtggga
attacccttatggacagcccagatggaacaacctggagaccagctgtaccacttgcactt
caggagcagcaggttacagaaacttaa
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