Ziziphus jujuba (Chinese jujube): 107421356
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Entry
107421356 CDS
T04794
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X2
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
107421356
Enzymes [BR:
zju01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
107421356
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Gene cluster
GFIT
Motif
Pfam:
CBM-like
Rhamnogal_lyase
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
107421356
NCBI-ProteinID:
XP_048331137
LinkDB
All DBs
Position
5:join(22293800..22293912,22294069..22294213,22294310..22294483,22294646..22294804,22295224..22295330,22295504..22295594,22297953..22298094,22298212..22298368,22299899..22300021,22300213..22300360,22300449..22300700)
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AA seq
536 aa
AA seq
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MLKGSSGFYCYAIYECLEGWPEFNIYETRIVFKLAIDKFLYMAIADNRQRVMPLLEDREV
PEHSEKLAYPEAVRFTNPNDPNLIGEVDDKYQYSMENKDNQVHGWICTEDQPTGFWQITP
SNEFRTCGPIKQDLTSHVGPITLAMFVSTHYAGEDVYLKFRDGESWKKVFGPIFIYVNSV
PQGDDATLSLWEDAKTQMMTEVQSWPYSFPESVEFQKSEERGNILGRLLVLDRYVKEDYI
PAKDACVGLAPPGDAGSWQTECKGYQFWTTADEDGYFSIYNVRTGDYNLYAWVPGFIGDY
LYENIVTIASGSSNEYVDLVYEPPRVGPTLWEIGIPDRSAAEFYVPDPDPMYINSLYVNH
PDRFRQYGLWSRYADADLYPSEDLVYTVGVCDYTTDWFFAQVTRKIDVGNEDNDDDTYVG
TTWQIRFEDQNIDVSGTYTLRVAIASATLAELQVRVNDPDATEPLYSSGLIGRDNAVARH
GIRGLHSLHSISIDGSLLIKGVNTIFLTQPRNDDEFRSFMYDYLRFEGPPNWSLFL
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagggttcctcaggcttctactgttatgcaatttatgagtgtttggagggatgg
cctgagttcaacatttatgaaacaagaatcgttttcaaattggcaatagacaagtttcta
tacatggcaatagcggacaatagacaaagagtcatgcccctgcttgaggatcgagaagta
ccagaacacagcgaaaaactagcctatccagaagctgtccgatttaccaatcccaatgat
cccaatctcataggagaggtggatgacaaataccagtactcgatggagaacaaggataat
caggttcatggatggatatgcacagaggaccaaccaacgggattctggcagattacaccc
agtaatgagtttagaacatgtggaccaatcaaacaggacctaacttctcatgtgggcccc
attactcttgctatgtttgttagtactcattatgctggagaagatgtatatttaaaattc
agagatggtgaatcatggaagaaggttttcggacctatatttatctatgttaattctgta
ccccaaggagatgatgccacactttcattatgggaggatgcgaaaacacaaatgatgaca
gaagtccaaagctggccatatagtttcccagaatctgtggaattccaaaagtctgaggaa
cgaggcaacattcttggtagactacttgtattagacagatatgttaaagaagactacata
ccagcaaaagatgcctgtgttggtctggcccctccaggagatgcaggatcatggcaaaca
gaatgcaagggctatcaattctggacaacggcagacgaggatggatatttttctatttac
aatgtacgtactggtgactataatctttatgcatgggtccctggtttcattggagactat
ctctatgagaatattgttaccatagcatcaggatcttcgaatgagtatgtggatcttgtt
tatgagcctccaagagttgggcccacgttgtgggaaataggcattccagatcgttctgct
gcagagttctatgttcctgatcctgatccaatgtatatcaacagcctttatgtcaatcat
ccagacagatttaggcagtacggactatggagcagatatgcagatgcagacttgtatccc
agtgaggacttggtttacacagttggtgtttgcgactataccacagactggttctttgca
caggtaaccaggaaaatagatgttggtaatgaggataatgatgatgacacttacgttgga
acaacatggcaaatccgcttcgaagatcaaaatattgacgtgagcggtacatatacacta
cgagtggccattgcatctgcaactctagctgaattgcaggttcgggttaatgatccggat
gcaacggagccactatattcgagcgggttgatagggagggataatgcggttgcaaggcac
ggaattcgtgggctccactcgctgcacagcatcagtatagacggttctcttcttattaaa
ggggtgaacactatcttccttacccaaccaagaaacgatgacgaattccgaagcttcatg
tatgattatctacggtttgaaggccctccaaattggtctctctttctctag
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