KEGG   Ziziphus jujuba (Chinese jujube): 107421580
Entry
107421580         CDS       T04794                                 
Name
(RefSeq) DNA mismatch repair protein MLH1 isoform X1
  KO
K08734  DNA mismatch repair protein MLH1
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03430  Mismatch repair
zju03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    107421580
   03460 Fanconi anemia pathway
    107421580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zju03400]
    107421580
DNA repair and recombination proteins [BR:zju03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     107421580
SSDB
Motif
Pfam: Mlh1_C DNA_mis_repair HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 107421580
NCBI-ProteinID: XP_015886329
UniProt: A0A6P4A0N6
LinkDB
Position
5:complement(join(27416110..27416154,27416515..27416675,27417661..27417835,27418016..27418177,27418537..27418702,27419228..27419336,27419433..27419527,27421178..27421316,27421503..27421572,27421971..27422069,27422769..27422917,27424042..27424252,27424371..27424505,27424959..27425031,27425336..27425508,27425684..27425917))
AA seq 731 aa
MEVDEEQERVARDPPKIYRLDESVVNRIAAGEVIQRPVSAVKELVENSLDAGSSSINVTV
KDGGLKLIQVSDNGHGIRYKDLPILCERHTTSKLSTFEDLQSIKSMGFRGEALASMTYVG
HVTVTTITEGQLHGYRVSYKDGVMEHEPRACAAVKGTQIMVENLFYNMTARRKTLQNAAD
DYSKIIDLLSRFAIHHINVSFSCRKHGAGRADVHSVATDARLNAIRSVYGVSVAHNLLEV
EASDDDLSSSVFQMSGLISNCNFVAKKTTMVLFINDRLVDWTALKRALEIVYSATLPKAS
KPFIYMSIIVPAEHVDVNVHPTKREVSLLNQEIIIEKIQSVVESKLRSSNEARTYDEQMA
EPSPSAQNNLLKDSNLSQSPSGGSKPQKVPVNKMVRTDATDPAGRLHAYLQNKPVDHLGT
DSSLTAVRSSIRQRRKPKETADLTSIQELIDEIDCNCHSGLLEVVRHCTYIGMADDVFAL
LQHDTHLYLANVVNLSKELMYQQVLRRFAHFNAIQLSDPAPLQELIMLALKEEDLETECS
GDHDLKEKIAEMNTELLKQKTEMLQEYFGIEIDMNGNLSRLPVVLDQYAPDMDHVPEFVL
CLGNDVDWEDEKNCFQAISAALGNFYAMHPPMLPNPSGDGLQFYEKKKLPWHPEDEGNPA
GKIGDVTMETEIDHELLSEAETAWAQREWSIQHVLIPAMRLFLKPPTFMATNGTFVQVAS
LEKLYKIFERC
NT seq 2196 nt   +upstreamnt  +downstreamnt
atggaagtggatgaagaacaagagagagtcgccagagaccctcccaaaatctaccgcctc
gacgagtcagtcgtcaaccgaatcgccgccggcgaggtcatccagcggccggtgtccgcg
gtcaaagagctcgtcgagaacagcctcgacgccggctcttcctccattaacgtcaccgtt
aaagacggtggtctcaagctcattcaagtctccgacaatggccatggcatccgctacaag
gacttgccaatactatgcgagaggcacacgacttcgaagttgtctacctttgaggatttg
cagtccataaagtcgatgggattcagaggagaagcgttggcgagcatgacctatgtcggt
catgttacagttaccaccattaccgaaggtcaattgcatggttacagggtatcttataag
gacggagtcatggagcatgaaccaagggcgtgtgctgctgtaaaaggaactcagataatg
gttgagaatttattctataatatgactgctcggaggaagacgctacaaaatgctgcagac
gattattctaagattatagacttgctaagccgctttgccattcatcatataaatgttagt
ttctcttgtagaaagcatggtgctggaagagcagatgtgcattctgttgctacagatgca
aggcttaatgctattcgatcagtttatggggtctcagtggctcacaatttgttggaagta
gaagcttcagacgatgatctatccagttcagtttttcaaatgagtggtctcatctccaat
tgtaattttgttgcaaagaaaacaacaatggtgcttttcataaatgacagattggtggac
tggactgcattgaagagggctctagaaattgtttattctgcaacactgccaaaagcatcg
aaacccttcatatatatgtcaatcatagtgccagcagagcatgttgatgtgaatgtgcac
ccaactaaaagagaggtaagccttttgaatcaggaaatcattattgagaagatacagtca
gtggtcgagtcaaaattgaggagctctaatgaagcgagaacatatgatgaacagatggct
gaaccatctccatctgctcaaaataatctactcaaggattcaaatctcagccagtcaccg
tcaggaggatcaaaacctcaaaaggttccagtcaataaaatggttagaacagatgcaact
gatcctgctgggaggttgcatgcgtacttgcaaaacaagcctgttgaccatcttggaacg
gattccagtttgacagcggtgaggtcttctattagacaaagaaggaaaccaaaggaaact
gcggatcttacaagcattcaggagcttattgatgagattgactgtaactgccattctggg
cttctggaggttgtcagacattgcacatatattggaatggcagatgatgtatttgcattg
cttcaacatgatactcatctctatcttgcaaatgttgtcaacttgagcaaagagcttatg
tatcagcaagttcttcgccggtttgcccatttcaatgctatacaattaagtgatccagct
cctctacaagagttgattatgttggcgctgaaagaggaagatttagaaactgaatgcagt
ggggatcatgacctaaaggagaagattgcagaaatgaatacagaattactcaagcaaaag
acagaaatgctacaggagtattttggcattgaaatagacatgaatgggaatttgtcaaga
cttccagtcgttctggaccagtacgcacctgacatggatcatgtccctgaatttgttctc
tgtctgggaaatgatgttgattgggaggatgaaaagaattgctttcaagcaatttcagct
gctctaggaaatttctatgccatgcatcctcccatgttgcccaacccatctggtgatggt
ttgcagttttatgaaaagaaaaaacttccatggcatcctgaagatgaaggaaatccagcc
ggtaaaataggggatgtcacaatggagactgaaattgatcatgaactgctttcggaggca
gagacagcatgggctcagcgggaatggtcaatccagcatgtcttgattccagctatgaga
ctctttcttaagccaccgacttttatggctacaaacggaacatttgttcaagtagcttca
ttggaaaaactctacaaaatttttgaaagatgctaa

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